Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.1e-204 716.5 364 100.0
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 5.0e-21 106.3 242 32.6
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 1.8e-18 97.8 222 36.0
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 3.1e-18 97.1 181 36.5
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 4.0e-18 96.7 220 31.8
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 6.8e-18 95.9 246 30.1
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.8e-18 95.9 217 30.4
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 2.6e-17 94.0 254 29.9
ATR1091G052 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.6e-17 94.0 187 37.4
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.6e-17 94.0 222 34.2
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 3.4e-17 93.6 208 31.7
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 3.4e-17 93.6 223 32.7
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.4e-17 93.2 222 34.2
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 4.4e-17 93.2 216 31.5
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 5.8e-17 92.8 217 31.8
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 5.8e-17 92.8 219 31.5
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 5.8e-17 92.8 223 29.6
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 7.5e-17 92.4 214 34.1
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 7.5e-17 92.4 219 31.5
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 9.8e-17 92.0 218 35.3
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 9.8e-17 92.0 216 32.9
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 1.3e-16 91.7 222 31.1
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 1.3e-16 91.7 216 31.0
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.7e-16 91.3 222 33.8
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 2.2e-16 90.9 216 32.9
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 6.4e-16 89.4 217 30.0
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 8.3e-16 89.0 246 28.9
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 1.1e-15 88.6 217 30.0
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 1.9e-15 87.8 217 31.8
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 3.2e-15 87.0 225 28.9
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 7.1e-15 85.9 216 32.9
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 2.1e-14 84.3 267 28.8
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 2.7e-14 84.0 244 29.9
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 2.7e-14 84.0 217 29.5
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 2.7e-14 84.0 218 28.9
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 4.6e-14 83.2 225 32.9
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 6.0e-14 82.8 220 30.0
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 6.0e-14 82.8 220 30.0
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 6.0e-14 82.8 222 31.5
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 7.8e-14 82.4 269 27.9
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 7.8e-14 82.4 217 33.2
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 1.0e-13 82.0 222 30.6
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.7e-13 81.3 216 30.6
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 2.3e-13 80.9 226 32.7
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 3.0e-13 80.5 220 31.4
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 3.0e-13 80.5 213 30.5
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 3.0e-13 80.5 218 29.4
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 5.1e-13 79.7 222 30.2
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 8.6e-13 79.0 217 29.5
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 8.6e-13 79.0 225 30.7
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 1.5e-12 78.2 222 28.8
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 1.5e-12 78.2 172 32.0
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 2.5e-12 77.4 217 29.5
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.5e-12 77.4 217 31.8
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 4.3e-12 76.6 211 32.2
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 7.3e-12 75.9 156 35.9
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 7.3e-12 75.9 232 31.5
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 9.5e-12 75.5 210 28.1
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 2.8e-11 73.9 151 35.8
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.1e-10 72.0 215 31.2
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 1.4e-10 71.6 154 34.4
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 4.0e-10 70.1 164 34.1
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 5.2e-10 69.7 116 36.2
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 5.2e-10 69.7 244 28.7
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 8.9e-10 68.9 154 32.5
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.2e-09 68.6 138 37.7
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.2e-09 68.6 205 31.7
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 1.5e-09 68.2 98 42.9
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 2.0e-09 67.8 96 43.8
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 4.4e-09 66.6 152 32.9
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 9.9e-09 65.5 115 33.9
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.7e-08 64.7 148 33.8
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 2.9e-08 63.9 170 30.0
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.9e-08 63.2 118 39.8
FAN16G1026 Fragaria x ananassa HOM05D014465 ORTHO05D010485 6.4e-08 62.8 94 42.6
FvH4_3g05540 Fragaria vesca HOM05D014465 ORTHO05D010485 8.4e-08 62.4 98 41.8
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.9e-07 61.2 117 33.3
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 1.9e-07 61.2 151 30.5
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 5.4e-07 59.7 175 30.3
Gohir.D06G142700 Gossypium hirsutum HOM05D008587 ORTHO05D010485 7.1e-07 59.3 98 38.8
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 7.1e-07 59.3 108 39.8
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 7.1e-07 59.3 148 33.1
Gorai.010G166500 Gossypium raimondii HOM05D008587 ORTHO05D010485 9.2e-07 58.9 107 38.3
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 1.2e-06 58.5 112 36.6
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.6e-06 58.2 225 25.8
Duzib235G1124 Durio zibethinus HOM05D008587 ORTHO05D010485 1.6e-06 58.2 107 38.3
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 4.6e-06 56.6 151 28.5
Gohir.A06G137500 Gossypium hirsutum HOM05D008587 ORTHO05D010485 6.0e-06 56.2 107 37.4
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 6.0e-06 56.2 123 35.8
RcHm_v2.0_Chr5g0014161 Rosa chinensis HOM05D014465 ORTHO05D010485 7.8e-06 55.8 82 42.7


User provided reference genes

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