Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 9.3e-78 293.5 152 100.0
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 3.7e-34 148.7 158 58.2
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 8.5e-31 137.5 96 74.0
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 1.5e-30 136.7 94 75.5
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 1.9e-30 136.3 97 73.2
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 1.9e-30 136.3 105 70.5
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 4.2e-30 135.2 105 69.5
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 7.2e-30 134.4 105 68.6
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 9.4e-30 134.0 90 75.6
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 9.4e-30 134.0 122 58.2
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 1.2e-29 133.7 100 68.0
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 2.1e-29 132.9 104 68.3
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 8.0e-29 131.0 92 73.9
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 1.0e-28 130.6 139 55.4
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 1.4e-28 130.2 146 54.1
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 1.4e-28 130.2 94 73.4
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 4.0e-28 128.6 90 73.3
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 1.2e-27 127.1 90 72.2
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 2.0e-27 126.3 96 67.7
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 2.6e-27 125.9 96 68.8
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 2.6e-27 125.9 99 65.7
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 2.6e-27 125.9 91 69.2
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 3.4e-27 125.6 97 67.0
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 4.4e-27 125.2 144 52.8
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 5.7e-27 124.8 137 54.7
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 9.8e-27 124.0 135 53.3
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 9.8e-27 124.0 96 66.7
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 2.2e-26 122.9 101 61.4
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 2.8e-26 122.5 94 68.1
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 6.3e-26 121.3 135 52.6
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 2.4e-25 119.4 96 66.7
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 2.4e-25 119.4 125 49.6
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 7.0e-25 117.9 97 62.9
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 1.6e-24 116.7 134 50.7
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 2.0e-24 116.3 125 48.8
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 3.5e-24 115.5 123 52.8
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 4.5e-24 115.2 116 52.6
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 7.7e-24 114.4 92 62.0
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 7.7e-24 114.4 162 44.4
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.7e-23 113.2 146 48.6
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 2.2e-23 112.8 94 64.9
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 3.8e-23 112.1 106 59.4
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 6.5e-23 111.3 147 51.0
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 8.5e-23 110.9 108 60.2
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 4.2e-22 108.6 112 55.4
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 4.2e-22 108.6 112 55.4
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 4.2e-22 108.6 112 55.4
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 5.5e-22 108.2 116 56.0
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 1.2e-21 107.1 84 63.1
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 2.8e-21 105.9 95 61.1
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 6.1e-21 104.8 115 54.8
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 6.1e-21 104.8 102 58.8
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 8.0e-21 104.4 134 47.8
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 1.4e-20 103.6 95 58.9
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 1.4e-20 103.6 152 46.1
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 2.3e-20 102.8 114 53.5
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 5.2e-20 101.7 78 65.4
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 5.2e-20 101.7 87 63.2
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 5.2e-20 101.7 70 72.9
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 6.8e-20 101.3 129 47.3
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 6.8e-20 101.3 108 54.6
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 1.2e-19 100.5 93 58.1
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 1.2e-19 100.5 105 56.2
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 5.7e-19 98.2 119 50.4
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 1.3e-18 97.1 98 55.1
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 1.7e-18 96.7 113 54.0
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 1.7e-18 96.7 94 57.4
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 2.8e-18 95.9 138 44.9
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 3.7e-18 95.5 111 52.3
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 3.7e-18 95.5 82 61.0
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 6.3e-18 94.7 121 49.6
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 1.1e-17 94.0 115 48.7
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 1.1e-17 94.0 101 55.4
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 1.1e-17 94.0 101 55.4
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 1.1e-17 94.0 91 58.2
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 1.4e-17 93.6 113 46.0
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 1.8e-17 93.2 96 52.1
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 1.8e-17 93.2 96 55.2
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 2.4e-17 92.8 140 46.4
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 2.0e-16 89.7 84 59.5
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 2.0e-16 89.7 84 59.5
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 2.0e-16 89.7 127 45.7
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 2.7e-16 89.4 91 56.0
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 3.5e-16 89.0 130 43.8
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 5.9e-16 88.2 94 55.3
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 1.0e-15 87.4 130 42.3
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 1.0e-15 87.4 91 53.8
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 1.0e-15 87.4 107 49.5
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 1.3e-15 87.0 58 79.3
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 2.9e-15 85.9 86 54.7
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 3.8e-15 85.5 113 47.8
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 5.0e-15 85.1 90 54.4
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 8.6e-15 84.3 115 44.3
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 1.1e-14 84.0 64 65.6
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 1.1e-14 84.0 132 42.4
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.1e-14 84.0 132 42.4
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 1.5e-14 83.6 95 49.5
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 1.9e-14 83.2 125 44.8
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.9e-14 83.2 127 42.5
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 3.3e-14 82.4 84 56.0
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 4.3e-14 82.0 129 43.4
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 9.5e-14 80.9 110 46.4
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 9.5e-14 80.9 123 43.9
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 1.6e-13 80.1 64 62.5
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 2.1e-13 79.7 125 43.2
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 4.7e-13 78.6 89 52.8
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.3e-12 76.3 114 42.1
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 5.7e-11 71.6 82 52.4
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 2.9e-10 69.3 96 43.8
SalBow6G1357 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.5e-06 57.0 39 69.2
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.9e-06 56.6 39 69.2
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 3.3e-06 55.8 146 33.6
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 3.3e-06 55.8 56 53.6


User provided reference genes

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