Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 0.0e+00 1261.9 706 100.0
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 7.8e-204 714.5 730 57.1
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 1.9e-202 709.9 723 57.4
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 1.6e-201 706.8 731 56.6
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.4e-200 703.7 729 56.7
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 6.9e-200 701.4 735 55.8
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 7.1e-197 691.4 733 55.8
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.0e-195 686.0 731 55.3
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 6.7e-195 684.9 731 54.6
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 5.6e-194 681.8 725 56.1
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.6e-193 680.2 729 54.5
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 6.2e-193 678.3 725 55.0
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 8.1e-193 677.9 733 55.7
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.8e-192 676.8 744 53.2
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 1.8e-192 676.8 730 55.6
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 1.3e-190 670.6 730 54.5
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 3.8e-190 669.1 816 50.4
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 2.5e-189 666.4 727 53.1
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.6e-188 663.7 733 54.8
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 3.0e-187 659.4 725 53.8
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 3.0e-187 659.4 725 57.2
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.1e-186 657.5 754 52.7
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 1.9e-186 656.8 727 54.1
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.9e-186 656.8 731 53.9
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.7e-186 655.2 742 52.6
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 2.8e-185 652.9 706 55.1
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 2.4e-184 649.8 722 53.6
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.3e-184 648.7 760 51.3
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 9.0e-184 647.9 733 53.2
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.6e-183 646.4 670 55.7
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 2.6e-183 646.4 737 53.3
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 2.6e-183 646.4 748 52.3
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 3.4e-183 646.0 731 52.1
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 3.4e-183 646.0 733 54.0
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.5e-183 645.6 731 52.4
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 5.8e-183 645.2 670 55.5
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 7.6e-183 644.8 739 51.3
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 7.6e-183 644.8 730 53.3
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 1.7e-182 643.7 739 52.6
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.1e-181 641.0 736 51.9
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 1.9e-181 640.2 732 53.0
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 2.5e-181 639.8 734 52.7
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 2.5e-181 639.8 737 52.2
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.2e-180 637.5 726 54.1
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.2e-180 637.5 732 52.7
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 1.2e-180 637.5 728 52.6
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.6e-180 637.1 733 52.7
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 1.8e-179 633.6 731 50.9
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 3.9e-179 632.5 706 53.8
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 5.1e-179 632.1 733 51.3
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 6.7e-179 631.7 720 51.8
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 8.7e-179 631.3 739 51.8
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 1.1e-178 630.9 732 52.5
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.5e-178 630.6 734 53.0
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 3.3e-178 629.4 727 51.7
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 3.3e-178 629.4 699 53.1
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 5.7e-178 628.6 728 52.1
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 2.2e-177 626.7 690 53.5
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 3.7e-177 625.9 726 51.1
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.1e-176 624.4 716 53.1
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 6.9e-176 621.7 670 55.2
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 2.0e-175 620.2 724 51.5
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 2.6e-175 619.8 741 51.8
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 1.7e-174 617.1 736 51.9
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 8.5e-174 614.8 719 51.6
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.4e-173 614.0 728 50.3
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 1.0e-171 607.8 735 49.4
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 6.7e-171 605.1 697 52.9
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.0e-170 603.6 726 50.8
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 3.3e-170 602.8 728 49.9
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 8.2e-169 598.2 701 51.5
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 2.0e-167 593.6 803 47.6
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 7.7e-167 591.7 802 47.6
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 1.2e-164 584.3 726 48.8
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 2.1e-164 583.6 733 50.8
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 2.3e-163 580.1 728 48.6
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 2.3e-163 580.1 728 48.6
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.2e-161 571.6 659 52.5
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.8e-160 570.5 747 47.7
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 5.3e-160 568.9 689 50.2
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.0e-159 567.0 696 49.7
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.3e-158 564.3 734 49.6
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 4.7e-156 555.8 671 49.2
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 4.0e-155 552.7 727 48.8
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 5.2e-155 552.4 716 51.3
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.3e-153 547.7 725 47.4
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 3.5e-151 539.7 770 45.2
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 5.9e-151 538.9 582 54.0
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 6.1e-148 528.9 727 46.4
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.3e-145 521.2 733 47.1
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 8.8e-139 498.4 682 45.3
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.0e-118 431.8 599 47.2
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.6e-108 397.9 365 60.3
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 8.1e-108 395.6 367 58.6
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 7.1e-96 355.9 425 51.8
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.2e-95 355.1 307 62.5
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.5e-93 347.4 543 42.2
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 2.2e-89 334.3 264 66.7
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 2.2e-89 334.3 580 42.6
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 3.9e-86 323.6 423 48.7
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 4.5e-82 310.1 679 32.8
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 6.2e-76 289.7 680 33.2
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.4e-75 287.7 653 32.2
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 2.3e-70 271.2 372 47.6
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.8e-67 261.5 694 29.7
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 5.9e-66 256.5 369 46.6
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 4.2e-64 250.4 352 49.1
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 4.6e-63 246.9 686 28.6
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 6.1e-55 219.9 277 47.7
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 4.5e-50 203.8 373 40.5
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 1.0e-49 202.6 503 35.6
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-48 198.4 445 35.3
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.1e-27 127.9 109 57.8
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.0e-26 125.2 84 66.7
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 2.3e-22 111.7 145 51.7
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 8.8e-22 109.8 241 37.8
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 9.8e-21 106.3 501 22.8
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.7e-18 98.2 173 39.3
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.5e-18 97.8 124 42.7
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.7e-15 87.4 75 64.0
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 6.1e-15 87.0 102 47.1
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 8.9e-14 83.2 135 37.8
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 1.5e-13 82.4 118 38.1
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 8.3e-12 76.6 55 69.1
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.6e-10 72.4 58 60.3
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 2.8e-07 61.6 71 52.1
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 3.6e-07 61.2 111 42.3
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.2e-06 57.4 41 68.3


User provided reference genes

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