Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G124 Amborella trichopoda HOM05D000962 ORTHO05D000752 8.7e-118 427.2 245 100.0
MBI03_g07139_MAGBIO Magnolia biondii HOM05D000962 ORTHO05D000752 8.1e-15 85.1 273 33.0
CiPaw.16G119300 Carya illinoinensis HOM05D000962 ORTHO05D000752 8.4e-12 75.1 252 31.0
PSO210G0106 Papaver somniferum HOM05D000962 ORTHO05D000752 1.1e-11 74.7 266 28.6
PSO761G0273 Papaver somniferum HOM05D000962 ORTHO05D000752 1.9e-11 73.9 263 28.5
Gohir.A10G158400 Gossypium hirsutum HOM05D000962 ORTHO05D000752 2.1e-10 70.5 250 31.2
Gorai.011G121400 Gossypium raimondii HOM05D000962 ORTHO05D000752 2.1e-10 70.5 250 31.2
Thecc.01G146900 Theobroma cacao HOM05D000962 ORTHO05D000752 4.6e-10 69.3 253 30.0
TPR.G12930 Trifolium pratense HOM05D000962 ORTHO05D000752 4.6e-10 69.3 255 29.0
Gohir.D10G110200 Gossypium hirsutum HOM05D000962 ORTHO05D000752 3.0e-09 66.6 250 30.4
Medtr8g095470 Medicago truncatula HOM05D000962 ORTHO05D000752 3.0e-09 66.6 255 28.6
HPP92_005647 Vanilla planifolia HOM05D000962 ORTHO05D000752 8.7e-09 65.1 103 38.8
Duzib147G0606 Durio zibethinus HOM05D000962 ORTHO05D000752 1.1e-08 64.7 251 30.3
Gohir.A05G061200 Gossypium hirsutum HOM05D000962 ORTHO05D000752 1.5e-08 64.3 248 28.6
SGA_v2.0_scaffold51G18839 Striga asiatica HOM05D000962 ORTHO05D000752 1.9e-08 63.9 242 29.8
Duzib187G0160 Durio zibethinus HOM05D000962 ORTHO05D000752 2.5e-08 63.5 247 31.6
Ciclev10026619m.g Citrus clementina HOM05D000962 ORTHO05D000752 3.3e-08 63.2 252 30.6
Duzib168G0578 Durio zibethinus HOM05D000962 ORTHO05D000752 4.3e-08 62.8 257 28.4
Nn1g04128 Nelumbo nucifera HOM05D000962 ORTHO05D000752 5.6e-08 62.4 243 30.9
QL10p038179 Quercus lobata HOM05D000962 ORTHO05D000752 5.6e-08 62.4 240 30.0
THA.LOC104800471 Tarenaya hassleriana HOM05D000962 ORTHO05D000752 5.6e-08 62.4 255 29.4
Aqoxy5G01858 Aquilegia oxysepala HOM05D000962 ORTHO05D000752 7.3e-08 62.0 232 29.3
Gorai.009G064400 Gossypium raimondii HOM05D000962 ORTHO05D000752 7.3e-08 62.0 246 28.5
CANSAT01G2095 Cannabis sativa HOM05D000962 ORTHO05D000752 9.6e-08 61.6 268 29.5
Lj5C75T13 Lonicera japonica HOM05D000962 ORTHO05D000752 9.6e-08 61.6 261 27.2
Gohir.A06G103700 Gossypium hirsutum HOM05D000962 ORTHO05D000752 1.6e-07 60.8 248 29.4
Gohir.D05G063700 Gossypium hirsutum HOM05D000962 ORTHO05D000752 1.6e-07 60.8 247 29.6
Gohir.D06G104400 Gossypium hirsutum HOM05D000962 ORTHO05D000752 1.6e-07 60.8 248 29.4
Gorai.010G119600 Gossypium raimondii HOM05D000962 ORTHO05D000752 1.6e-07 60.8 248 29.4
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 2.1e-07 60.5 251 29.1
Nn8g40103 Nelumbo nucifera HOM05D000962 ORTHO05D000752 2.8e-07 60.1 257 28.4
Prupe.1G396600 Prunus persica HOM05D000962 ORTHO05D000752 2.8e-07 60.1 256 30.5
MSTRG.7338 Avicennia marina HOM05D000962 ORTHO05D000752 3.6e-07 59.7 249 28.1
BolC9t59596H Brassica oleracea HOM05D000962 ORTHO05D000752 3.6e-07 59.7 252 29.4
Migut.H02540 Erythranthe guttata HOM05D000962 ORTHO05D000752 3.6e-07 59.7 238 32.8
MBI06_g23078_MAGBIO Magnolia biondii HOM05D000962 ORTHO05D000752 3.6e-07 59.7 248 27.0
Thecc.06G031400 Theobroma cacao HOM05D000962 ORTHO05D000752 3.6e-07 59.7 257 27.6
Haze_07707 Corylus avellana HOM05D000962 ORTHO05D000752 4.8e-07 59.3 251 29.1
Manes.12G081300 Manihot esculenta HOM05D000962 ORTHO05D000752 4.8e-07 59.3 247 29.1
Potri.018G016500 Populus trichocarpa HOM05D000962 ORTHO05D000752 4.8e-07 59.3 252 29.0
Actinidia18217 Actinidia chinensis HOM05D000962 ORTHO05D000752 6.2e-07 58.9 103 35.0
Cfa019320 Carpinus fangiana HOM05D000962 ORTHO05D000752 8.1e-07 58.5 251 29.1
TAR627G0880 Trochodendron aralioides HOM05D000962 ORTHO05D000752 8.1e-07 58.5 251 27.9
MD15G1043200 Malus domestica HOM05D000962 ORTHO05D000752 1.1e-06 58.2 253 28.9
Psat7g040640 Pisum sativum HOM05D000962 ORTHO05D000752 1.1e-06 58.2 257 28.0
Potri.006G266600 Populus trichocarpa HOM05D000962 ORTHO05D000752 1.1e-06 58.2 75 38.7
THA.LOC104819365 Tarenaya hassleriana HOM05D000962 ORTHO05D000752 1.1e-06 58.2 245 29.4
TWI31G0768 Tripterygium wilfordii HOM05D000962 ORTHO05D000752 1.1e-06 58.2 250 30.4
COL.COLO4_18977 Corchorus olitorius HOM05D000962 ORTHO05D000752 1.4e-06 57.8 259 31.3
Cfa019319 Carpinus fangiana HOM05D000962 ORTHO05D000752 1.8e-06 57.4 251 29.9
HPP92_005634 Vanilla planifolia HOM05D000962 ORTHO05D000752 1.8e-06 57.4 84 39.3
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 2.4e-06 57.0 251 28.7
CANSAT25G2500 Cannabis sativa HOM05D000962 ORTHO05D000752 2.4e-06 57.0 247 28.7
Hma1.2p1_0242F.1_g100770 Hydrangea macrophylla HOM05D000962 ORTHO05D000752 2.4e-06 57.0 256 27.3
Thecc.09G013100 Theobroma cacao HOM05D000962 ORTHO05D000752 2.4e-06 57.0 260 28.8
TAR625G1167 Trochodendron aralioides HOM05D000962 ORTHO05D000752 2.4e-06 57.0 252 27.8
ATR0580G111 Amborella trichopoda HOM05D000962 ORTHO05D000752 3.1e-06 56.6 264 26.9
Carub.0006s0740 Capsella rubella HOM05D000962 ORTHO05D000752 3.1e-06 56.6 249 28.9
Dinv16423 Davidia involucrata HOM05D000962 ORTHO05D000752 3.1e-06 56.6 254 26.0
Potri.006G266700 Populus trichocarpa HOM05D000962 ORTHO05D000752 3.1e-06 56.6 252 27.8
TWI79G0484 Tripterygium wilfordii HOM05D000962 ORTHO05D000752 3.1e-06 56.6 251 29.9
Atru.chr7.2577 Acer truncatum HOM05D000962 ORTHO05D000752 4.0e-06 56.2 252 29.4
MSTRG.2474 Avicennia marina HOM05D000962 ORTHO05D000752 4.0e-06 56.2 235 30.2
Aa31LG3G18060 Aethionema arabicum HOM05D000962 ORTHO05D000752 5.3e-06 55.8 245 26.5
HanXRQChr04g0097931 Helianthus annuus HOM05D000962 ORTHO05D000752 5.3e-06 55.8 237 25.7
MBI07_g30195_MAGBIO Magnolia biondii HOM05D000962 ORTHO05D000752 5.3e-06 55.8 249 26.5
Manes.04G110554 Manihot esculenta HOM05D000962 ORTHO05D000752 5.3e-06 55.8 250 26.0
TAR381G1120 Trochodendron aralioides HOM05D000962 ORTHO05D000752 5.3e-06 55.8 264 29.2
Aa31LG8G2480 Aethionema arabicum HOM05D000962 ORTHO05D000752 6.9e-06 55.5 233 29.6
AL6G18950 Arabidopsis lyrata HOM05D000962 ORTHO05D000752 6.9e-06 55.5 252 28.6
MSTRG.13198 Avicennia marina HOM05D000962 ORTHO05D000752 6.9e-06 55.5 251 27.9
Nitab4.5_0001652g0050 Nicotiana tabacum HOM05D000962 ORTHO05D000752 6.9e-06 55.5 238 26.5
Cpa.g.sc80.75 Carica papaya HOM05D000962 ORTHO05D000752 9.0e-06 55.1 46 60.9
Cfa001942 Carpinus fangiana HOM05D000962 ORTHO05D000752 9.0e-06 55.1 260 28.5
CiPaw.01G250000 Carya illinoinensis HOM05D000962 ORTHO05D000752 9.0e-06 55.1 267 27.7
Dinv03405 Davidia involucrata HOM05D000962 ORTHO05D000752 9.0e-06 55.1 259 29.0
Lj4g0000310 Lotus japonicus HOM05D000962 ORTHO05D000752 9.0e-06 55.1 254 28.7


User provided reference genes

Program Settings