Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.9e-131 471.5 236 100.0
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.4e-96 356.7 224 80.8
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 4.5e-95 351.7 232 76.7
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.3e-94 350.1 230 77.0
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 2.9e-94 349.0 230 77.4
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 4.9e-94 348.2 230 77.4
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 6.5e-94 347.8 230 77.0
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 1.4e-93 346.7 230 76.5
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 2.5e-93 345.9 230 77.4
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.6e-92 343.2 229 75.5
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.1e-92 342.8 223 77.6
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 4.6e-92 341.7 229 76.0
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 6.0e-92 341.3 224 77.7
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 6.0e-92 341.3 232 73.3
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 7.9e-92 340.9 238 72.3
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.3e-91 340.1 232 72.8
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.8e-91 339.7 224 76.3
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.8e-91 339.7 230 76.5
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.3e-91 339.3 221 77.8
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 2.3e-91 339.3 225 76.9
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 2.3e-91 339.3 232 72.4
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 3.9e-91 338.6 231 74.9
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 3.9e-91 338.6 226 77.0
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 5.1e-91 338.2 229 75.5
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.1e-91 338.2 230 74.3
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 5.1e-91 338.2 233 73.4
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.7e-91 337.8 231 74.9
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 8.7e-91 337.4 229 75.1
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 8.7e-91 337.4 225 75.6
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.1e-90 337.0 220 77.7
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 1.1e-90 337.0 234 73.9
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.9e-90 336.3 229 73.8
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 2.5e-90 335.9 241 73.0
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 3.3e-90 335.5 238 71.8
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 4.3e-90 335.1 226 77.0
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 4.3e-90 335.1 221 75.6
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 5.7e-90 334.7 234 74.4
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 5.7e-90 334.7 230 73.9
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 5.7e-90 334.7 230 73.9
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 7.4e-90 334.3 235 71.9
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 9.6e-90 334.0 232 73.7
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 2.1e-89 332.8 239 71.5
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.1e-89 332.8 228 73.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.1e-89 332.8 228 73.2
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 2.8e-89 332.4 239 71.5
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 3.7e-89 332.0 235 71.1
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 3.7e-89 332.0 225 74.7
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 4.8e-89 331.6 235 71.5
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.4e-88 330.1 225 74.7
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.8e-88 329.7 232 74.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 2.4e-88 329.3 242 70.7
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 2.4e-88 329.3 242 70.7
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 3.1e-88 328.9 233 72.1
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 4.1e-88 328.6 225 76.0
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.3e-88 328.2 235 70.6
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 6.9e-88 327.8 232 73.3
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.2e-87 327.0 229 74.7
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.8e-87 324.7 242 69.4
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 5.8e-87 324.7 232 72.4
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.3e-86 323.6 217 74.7
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.2e-86 322.8 242 69.0
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.2e-86 322.8 235 70.6
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.2e-86 322.8 235 70.6
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 2.9e-86 322.4 233 70.4
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.5e-84 315.5 250 66.8
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 4.6e-84 315.1 231 71.9
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.0e-83 313.9 246 69.9
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.3e-83 313.5 246 69.5
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.8e-83 313.2 222 73.0
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.3e-83 312.8 228 68.0
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.7e-83 310.8 222 72.5
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 4.3e-82 308.5 233 68.7
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 9.7e-82 307.4 235 65.5
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 4.8e-81 305.1 235 69.8
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 1.4e-80 303.5 201 77.6
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 5.3e-80 301.6 228 69.7
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.2e-79 300.4 235 66.4
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 6.5e-78 294.7 235 66.0
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 8.5e-78 294.3 198 74.7
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 7.2e-77 291.2 196 75.0
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.3e-74 282.0 222 68.5
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.4e-72 276.2 197 73.1
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 1.0e-70 270.8 183 75.4
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 1.1e-69 267.3 226 63.3
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.5e-69 266.2 222 62.2
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 4.4e-66 255.4 253 56.9
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 8.0e-60 234.6 218 55.0
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.8e-59 233.4 135 85.9
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 8.2e-57 224.6 221 57.9
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 5.5e-53 211.8 226 51.8
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 3.6e-52 209.1 140 75.7
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 3.4e-50 202.6 151 68.9
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.1e-48 197.6 154 66.2
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 4.5e-47 192.2 245 47.3
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.2e-28 131.0 82 75.6
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.9e-24 117.1 220 32.3
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 5.4e-16 89.0 118 44.9
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 2.9e-09 66.6 57 61.4


User provided reference genes

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