Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.2e-222 776.2 388 100.0
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 5.0e-144 515.0 341 74.2
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 5.5e-143 511.5 339 76.1
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 7.2e-143 511.1 341 72.1
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 3.6e-142 508.8 333 74.8
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.6e-142 508.8 333 73.3
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.0e-141 505.8 341 72.4
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 4.0e-141 505.4 341 72.1
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 5.2e-141 505.0 333 73.9
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 5.2e-141 505.0 345 73.0
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.2e-140 503.8 341 72.1
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.5e-140 503.4 344 72.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.5e-140 503.4 341 73.0
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.0e-140 503.1 341 72.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 3.4e-140 502.3 344 71.5
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 4.4e-140 501.9 339 72.0
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 5.7e-140 501.5 346 70.5
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 9.8e-140 500.7 341 72.1
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 9.8e-140 500.7 346 71.7
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.9e-139 498.4 323 73.4
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.9e-139 498.4 341 70.7
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 8.3e-139 497.7 342 72.2
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.1e-138 497.3 344 71.5
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.8e-138 496.5 350 69.7
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 3.1e-138 495.7 351 69.2
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 3.1e-138 495.7 340 72.6
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 4.1e-138 495.4 341 71.6
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 7.0e-138 494.6 333 71.8
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.2e-137 493.8 341 70.7
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.0e-137 493.0 341 71.6
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.5e-137 492.3 338 71.0
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 2.3e-136 489.6 332 72.3
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 2.3e-136 489.6 339 70.2
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 2.9e-136 489.2 341 69.5
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 2.9e-136 489.2 336 72.0
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.9e-136 489.2 340 70.9
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.6e-136 488.0 341 70.1
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 8.6e-136 487.6 330 70.9
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.5e-135 486.9 327 72.8
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.5e-135 486.9 340 70.6
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.9e-135 486.5 318 73.6
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.9e-135 486.5 339 69.9
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.9e-135 486.5 338 69.5
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.9e-135 486.5 348 68.7
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 3.3e-135 485.7 342 70.8
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 4.3e-135 485.3 341 69.5
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 5.6e-135 485.0 354 69.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 5.6e-135 485.0 338 71.9
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 9.5e-135 484.2 355 68.7
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.2e-134 483.8 341 69.2
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.2e-134 483.8 339 69.6
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.6e-134 483.4 297 78.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.1e-134 483.0 337 70.3
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.8e-134 482.6 339 70.8
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 2.8e-134 482.6 339 69.9
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 4.7e-134 481.9 346 70.5
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 6.1e-134 481.5 339 70.5
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 5.2e-133 478.4 340 69.4
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 5.2e-133 478.4 297 77.4
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 8.9e-133 477.6 341 70.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 4.4e-132 475.3 338 67.5
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.4e-132 475.3 339 69.3
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 2.9e-131 472.6 338 68.9
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 1.1e-130 470.7 338 68.9
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 1.1e-130 470.7 338 68.9
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.4e-130 470.3 338 68.9
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.9e-130 469.9 371 65.5
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.9e-130 469.9 347 67.4
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.4e-130 469.5 336 69.0
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 3.2e-130 469.2 338 68.9
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 4.1e-130 468.8 339 67.0
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 7.0e-130 468.0 333 69.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 9.2e-130 467.6 339 68.1
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.2e-129 467.2 338 68.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.6e-129 466.8 343 67.6
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.7e-129 466.1 339 68.1
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.0e-128 464.2 334 68.6
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.7e-128 463.4 344 66.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 8.6e-128 461.1 346 67.9
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.1e-126 456.4 341 67.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 4.7e-126 455.3 345 68.1
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.1e-121 439.9 262 80.2
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.7e-120 436.8 341 64.8
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 5.1e-120 435.3 344 63.4
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 2.3e-117 426.4 303 66.3
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.7e-113 412.9 321 61.7
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.5e-113 412.5 301 64.8
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 2.3e-112 409.8 246 80.1
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.0e-109 399.1 342 61.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 8.7e-104 381.3 231 80.5
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.6e-103 377.9 366 56.3
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.5e-100 370.5 352 57.1
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.5e-100 370.5 369 57.5
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 3.4e-100 369.4 341 58.1
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.6e-97 360.5 342 56.7
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.1e-95 354.4 526 42.8
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.5e-95 354.0 223 77.6
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 6.4e-91 338.6 256 67.2
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.3e-80 304.3 181 81.2
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.7e-78 296.2 305 54.1
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.1e-69 268.1 217 59.0
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.1e-69 268.1 154 81.8
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.4e-68 263.1 395 39.5
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.2e-66 256.5 177 70.6
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.3e-62 244.6 319 43.9
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.3e-55 219.9 122 86.1
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 9.1e-53 211.8 404 36.9
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 9.4e-50 201.8 346 37.6
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 2.1e-49 200.7 127 76.4
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.8e-46 189.5 126 72.2
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.1e-37 159.8 97 75.3
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 4.2e-34 149.8 93 72.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.6e-33 147.9 83 85.5
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 5.2e-24 116.3 76 73.7
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.9e-19 100.5 52 86.5
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.6e-17 93.6 76 60.5
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.5e-15 88.2 56 82.1
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.2e-09 68.6 38 71.1
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 2.0e-07 61.2 141 33.3
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 8.3e-06 55.8 72 47.2


User provided reference genes

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