Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 6.5e-75 283.9 135 100.0
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 1.5e-50 203.0 125 75.2
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 7.3e-50 200.7 129 72.1
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 1.2e-49 199.9 124 73.4
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 1.6e-49 199.5 116 77.6
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 2.8e-49 198.7 126 74.6
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 2.8e-49 198.7 118 76.3
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 3.6e-49 198.4 125 72.0
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 4.7e-49 198.0 137 70.1
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 8.1e-49 197.2 126 70.6
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 1.4e-48 196.4 125 72.0
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 1.8e-48 196.1 130 70.8
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 3.1e-48 195.3 126 71.4
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 4.0e-48 194.9 125 71.2
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 5.2e-48 194.5 127 68.5
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 6.8e-48 194.1 125 71.2
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 6.8e-48 194.1 126 72.2
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 6.8e-48 194.1 126 71.4
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 1.2e-47 193.4 126 69.0
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 1.2e-47 193.4 129 69.0
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 1.2e-47 193.4 126 71.4
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 1.5e-47 193.0 127 71.7
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 1.5e-47 193.0 127 68.5
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 1.5e-47 193.0 127 73.2
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 2.0e-47 192.6 120 70.8
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 5.8e-47 191.0 133 68.4
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 5.8e-47 191.0 115 76.5
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 7.5e-47 190.7 126 69.8
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 1.3e-46 189.9 132 68.2
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 2.2e-46 189.1 131 71.0
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 2.9e-46 188.7 127 70.9
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 2.9e-46 188.7 126 69.8
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 2.9e-46 188.7 127 71.7
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 3.7e-46 188.3 130 67.7
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 3.7e-46 188.3 127 71.7
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 4.9e-46 188.0 126 68.3
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 6.4e-46 187.6 127 67.7
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 8.3e-46 187.2 117 71.8
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 8.3e-46 187.2 126 68.3
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 1.1e-45 186.8 127 68.5
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 1.1e-45 186.8 120 68.3
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 1.4e-45 186.4 126 68.3
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 1.9e-45 186.0 132 67.4
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 2.4e-45 185.7 124 69.4
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 3.2e-45 185.3 127 67.7
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 5.4e-45 184.5 126 67.5
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 7.1e-45 184.1 130 66.9
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 1.2e-44 183.3 126 67.5
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 1.2e-44 183.3 127 70.9
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 2.1e-44 182.6 126 67.5
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 2.7e-44 182.2 127 70.1
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 2.7e-44 182.2 126 67.5
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 2.7e-44 182.2 126 66.7
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 2.7e-44 182.2 126 66.7
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 2.7e-44 182.2 118 72.0
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 1.0e-43 180.3 150 59.3
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 1.0e-43 180.3 126 66.7
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 3.9e-43 178.3 127 66.1
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 5.1e-43 177.9 131 67.2
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 5.1e-43 177.9 125 65.6
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 5.1e-43 177.9 102 77.5
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 1.1e-42 176.8 123 66.7
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 1.5e-42 176.4 102 77.5
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 2.5e-42 175.6 102 75.5
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 4.3e-42 174.9 102 76.5
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 5.6e-42 174.5 102 76.5
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 2.1e-41 172.6 102 73.5
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 8.1e-41 170.6 102 75.5
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 5.2e-40 167.9 113 69.9
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 1.5e-39 166.4 125 63.2
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 1.5e-39 166.4 125 63.2
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 2.6e-39 165.6 102 73.5
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 4.4e-39 164.9 125 62.4
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 5.8e-39 164.5 115 63.5
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 7.6e-39 164.1 115 65.2
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 7.6e-39 164.1 102 73.5
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 1.3e-38 163.3 115 65.2
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 1.3e-38 163.3 115 65.2
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 1.3e-38 163.3 134 56.7
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 1.7e-38 162.9 118 62.7
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 2.9e-38 162.2 115 62.6
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 2.9e-38 162.2 115 64.3
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 2.9e-38 162.2 115 62.6
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 3.8e-38 161.8 136 56.6
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 1.1e-37 160.2 130 59.2
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 1.4e-37 159.8 127 63.0
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 2.4e-37 159.1 115 62.6
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 4.6e-36 154.8 115 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 3.4e-31 138.7 104 59.6
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 6.4e-30 134.4 97 70.1
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 1.1e-29 133.7 101 59.4
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 9.3e-29 130.6 86 69.8
DCAR_011285 Daucus carota HOM05D006998 ORTHO05D008733 3.5e-28 128.6 122 53.3
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 1.7e-27 126.3 95 63.2
Dinv25701 Davidia involucrata HOM05D006998 ORTHO05D008733 5.1e-27 124.8 67 82.1
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 1.9e-26 122.9 134 45.5
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 1.4e-24 116.7 81 69.1
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 1.4e-24 116.7 81 69.1
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 1.8e-24 116.3 81 69.1
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 1.5e-23 113.2 82 65.9
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 4.5e-23 111.7 78 67.9
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 4.5e-23 111.7 82 69.5
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.9e-21 106.3 84 61.9
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 2.7e-20 102.4 94 50.0
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 3.5e-20 102.1 77 59.7
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 3.0e-19 99.0 73 63.0
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 8.7e-19 97.4 70 64.3
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 2.5e-18 95.9 72 59.7
Sed0022519 Sechium edule HOM05D006998 ORTHO05D008733 1.1e-13 80.5 44 75.0
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 1.4e-13 80.1 60 63.3
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 4.2e-13 78.6 60 63.3
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 2.1e-12 76.3 60 58.3
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 2.1e-12 76.3 60 58.3
Cre09.g413300 Chlamydomonas reinhardtii HOM05D006998 ORTHO05D008733 4.6e-12 75.1 58 56.9
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 4.6e-12 75.1 81 49.4
BcaB01g01217 Brassica carinata HOM05D006998 ORTHO05D008733 5.6e-10 68.2 68 51.5
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 6.9e-08 61.2 62 48.4
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 5.8e-07 58.2 49 55.1


User provided reference genes

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