Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1032G002 Amborella trichopoda HOM05D018341 ORTHO05D000224 9.5e-42 172.9 79 100.0
CANSAT54G0926 Cannabis sativa HOM05D018341 ORTHO05D000224 9.5e-34 146.4 71 94.4
CANSAT35G1944 Cannabis sativa HOM05D000004 ORTHO05D000002 9.9e-31 136.3 71 88.7
CANSAT80G1174 Cannabis sativa HOM05D000004 ORTHO05D023459 6.4e-30 133.7 71 87.3
CANSAT64G2663 Cannabis sativa HOM05D018341 ORTHO05D000224 8.4e-30 133.3 71 85.9
CANSAT80G2636 Cannabis sativa HOM05D018341 ORTHO05D023459 6.6e-27 123.6 71 81.7
CANSAT11G2235 Cannabis sativa HOM05D018341 ORTHO05D023459 4.3e-10 67.8 71 53.5
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 7.4e-10 67.0 70 34.3
SHI49964 Sapria himalayana HOM05D010253 ORTHO05D000002 1.6e-09 65.9 70 34.3
SHI50618 Sapria himalayana HOM05D010253 ORTHO05D000002 1.6e-09 65.9 70 34.3
FvH4_3g31691 Fragaria vesca HOM05D000004 ORTHO05D000224 3.7e-09 64.7 71 40.8
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 6.2e-09 63.9 71 40.8
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 1.4e-08 62.8 71 39.4
Rhsim10G0033400 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.8e-08 62.4 72 38.9
Rhsim01G0132500 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.0e-08 61.2 72 38.9
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.0e-08 61.2 72 43.1
RcHm_v2.0_Chr2g0145931 Rosa chinensis HOM05D000004 ORTHO05D000002 4.0e-08 61.2 73 39.7
PSO421G0639 Papaver somniferum HOM05D023523 ORTHO05D000224 6.9e-08 60.5 71 36.6
PSO421G0701 Papaver somniferum HOM05D023523 ORTHO05D000224 6.9e-08 60.5 71 36.6
RcHm_v2.0_Chr2g0130801 Rosa chinensis HOM05D000004 ORTHO05D000034 9.0e-08 60.1 73 39.7
PSO017G4340 Papaver somniferum HOM05D023523 ORTHO05D000224 2.6e-07 58.5 71 33.8
PSO478G0602 Papaver somniferum HOM05D023523 ORTHO05D000224 2.6e-07 58.5 71 32.4
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 2.6e-07 58.5 72 29.2
PSO339G5756 Papaver somniferum HOM05D000004 ORTHO05D000224 3.4e-07 58.2 70 38.6
FvH4_7g04361 Fragaria vesca HOM05D000004 ORTHO05D000224 5.8e-07 57.4 60 41.7
PSO017G0809 Papaver somniferum HOM05D023523 ORTHO05D000224 5.8e-07 57.4 71 33.8
PSO384G3945 Papaver somniferum HOM05D000004 ORTHO05D000224 5.8e-07 57.4 66 37.9
Oeu064005.1 Olea europaea HOM05D000004 ORTHO05D000034 1.7e-06 55.8 72 33.3
PSO017G2733 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-06 55.8 67 38.8
PSO675G6520 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-06 55.8 67 38.8
ECA246G4027 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.9e-06 55.1 74 37.8
Oeu043006.1 Olea europaea HOM05D008284 ORTHO05D000224 2.9e-06 55.1 72 30.6
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-06 54.7 66 36.4
CSS0046557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-06 54.7 66 36.4
CiPaw.14G122600 Carya illinoinensis HOM05D000004 ORTHO05D000224 3.8e-06 54.7 72 31.9
Oeu055756.1 Olea europaea HOM05D008284 ORTHO05D000224 3.8e-06 54.7 72 31.9
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-06 54.3 66 36.4
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 4.9e-06 54.3 71 36.6
CARHR115150 Cardamine hirsuta HOM05D012295 ORTHO05D000224 6.4e-06 53.9 75 29.3
Oeu045530.1 Olea europaea HOM05D008284 ORTHO05D000224 6.4e-06 53.9 72 31.9
PSO675G2602 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-06 53.9 67 38.8
Prupe.1G169500 Prunus persica HOM05D000004 ORTHO05D000002 8.4e-06 53.5 62 38.7


User provided reference genes

Program Settings