Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0988G008 Amborella trichopoda HOM05D003792 ORTHO05D003195 8.0e-163 577.0 287 100.0
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 8.6e-16 88.6 256 31.2
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 2.5e-15 87.0 200 34.5
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.5e-15 87.0 227 34.8
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 3.6e-14 83.2 234 30.8
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.0e-13 81.6 241 32.0
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 2.3e-13 80.5 239 30.5
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 5.8e-12 75.9 220 30.9
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 9.8e-12 75.1 259 27.8
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 4.9e-11 72.8 248 30.2
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 4.9e-11 72.8 228 31.6
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 6.4e-11 72.4 220 32.3
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.9e-10 70.9 242 26.9
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 2.4e-10 70.5 250 28.8
SEGI_40396 Sequoiadendron giganteum HOM05D003792 ORTHO05D003195 2.4e-10 70.5 124 37.1
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 9.2e-10 68.6 250 29.6
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 1.2e-09 68.2 208 32.2
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 1.6e-09 67.8 213 32.9
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 2.0e-09 67.4 222 29.3
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 3.5e-09 66.6 233 28.8
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 3.5e-09 66.6 212 34.0
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 6.0e-09 65.9 228 30.7
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 7.8e-09 65.5 232 29.3
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 1.3e-08 64.7 230 28.7
Aqoxy5G01231 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 3.9e-08 63.2 236 26.7
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 6.6e-08 62.4 223 29.1
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 6.6e-08 62.4 181 29.8
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 6.6e-08 62.4 246 29.7
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 8.6e-08 62.0 240 28.8
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 1.1e-07 61.6 226 26.1
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.5e-07 61.2 236 27.5
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 3.3e-07 60.1 207 30.4
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 7.3e-07 58.9 223 25.1
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 9.5e-07 58.5 241 29.5
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 9.5e-07 58.5 226 25.7
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 1.2e-06 58.2 217 27.2
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.2e-06 58.2 146 31.5
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 1.6e-06 57.8 235 27.2
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 1.6e-06 57.8 242 26.4
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 2.1e-06 57.4 250 28.0
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 2.8e-06 57.0 221 28.1
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 2.8e-06 57.0 231 29.0
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.8e-06 57.0 217 29.0
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 3.6e-06 56.6 260 28.5
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 3.6e-06 56.6 213 28.2
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 4.7e-06 56.2 224 27.2
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 4.7e-06 56.2 224 27.2
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.7e-06 56.2 133 30.8
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.7e-06 56.2 213 28.2
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 6.2e-06 55.8 209 28.2
CDE10G0229 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 6.2e-06 55.8 192 30.7
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 8.0e-06 55.5 220 29.5


User provided reference genes

Program Settings