Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 7.4e-30 133.3 70 100.0
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.1e-17 92.8 70 67.1
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 9.4e-17 89.7 68 67.6
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 4.7e-16 87.4 70 60.0
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 1.4e-15 85.9 70 60.0
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 1.8e-15 85.5 68 61.8
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 3.9e-15 84.3 68 58.8
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 3.9e-15 84.3 70 60.0
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 8.8e-15 83.2 69 55.1
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.1e-14 82.8 68 60.3
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.1e-14 82.8 70 60.0
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.1e-14 82.8 70 60.0
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.0e-14 82.0 68 58.8
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 2.0e-14 82.0 70 58.6
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 2.6e-14 81.6 70 57.1
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.6e-14 81.6 70 57.1
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 2.6e-14 81.6 70 55.7
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.3e-14 81.3 70 55.7
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.3e-14 81.3 68 58.8
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 3.3e-14 81.3 70 54.3
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.4e-14 80.9 70 58.6
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 4.4e-14 80.9 69 58.0
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 5.7e-14 80.5 70 57.1
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 7.4e-14 80.1 70 55.7
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 7.4e-14 80.1 70 52.9
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 1.3e-13 79.3 70 58.6
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.3e-13 79.3 68 57.4
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.7e-13 79.0 68 57.4
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 2.2e-13 78.6 61 59.0
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.2e-13 78.6 67 58.2
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 2.8e-13 78.2 70 52.9
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 2.8e-13 78.2 70 55.7
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 3.7e-13 77.8 70 55.7
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 4.8e-13 77.4 70 52.9
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 4.8e-13 77.4 70 52.9
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 6.3e-13 77.0 61 60.7
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 6.3e-13 77.0 70 54.3
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 6.3e-13 77.0 68 52.9
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.1e-12 76.3 69 56.5
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.4e-12 75.9 61 59.0
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 4.1e-12 74.3 67 53.7
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.1e-12 74.3 68 55.9
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.3e-12 73.9 68 54.4
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 9.1e-12 73.2 70 50.0
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 9.1e-12 73.2 70 50.0
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 9.1e-12 73.2 70 54.3
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 1.2e-11 72.8 70 51.4
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.6e-11 72.4 68 54.4
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 2.0e-11 72.0 68 52.9
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 5.9e-11 70.5 70 48.6
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 7.7e-11 70.1 70 52.9
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.0e-10 69.7 67 52.2
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 1.7e-10 68.9 61 54.1
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.9e-10 68.2 67 50.7
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 3.8e-10 67.8 70 45.7
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 3.8e-10 67.8 66 45.5
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 6.5e-10 67.0 68 47.1
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 6.5e-10 67.0 74 52.7
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 8.5e-10 66.6 67 52.2
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 1.1e-09 66.2 70 45.7
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 1.1e-09 66.2 70 45.7
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 1.5e-09 65.9 52 59.6
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.9e-09 65.5 67 52.2
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 3.2e-09 64.7 67 44.8
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 5.5e-09 63.9 65 47.7
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 2.1e-08 62.0 65 44.6
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 2.1e-08 62.0 60 46.7
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 4.7e-08 60.8 72 44.4
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 4.7e-08 60.8 74 45.9
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 8.0e-08 60.1 66 43.9
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.8e-07 58.9 71 43.7
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 1.8e-07 58.9 65 43.1
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 3.0e-07 58.2 70 45.7
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 4.0e-07 57.8 74 40.5
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 5.2e-07 57.4 68 44.1
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 8.8e-07 56.6 70 38.6
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 2.0e-06 55.5 68 47.1
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 2.0e-06 55.5 67 37.3


User provided reference genes

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