Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0974G001 Amborella trichopoda HOM05D006569 ORTHO05D007515 2.1e-138 495.7 254 100.0
ATR1145G048 Amborella trichopoda HOM05D006569 ORTHO05D007515 1.2e-40 171.0 102 85.3
CARHR198030 Cardamine hirsuta HOM05D006569 ORTHO05D007515 3.5e-21 106.3 122 44.3
FvH4_6g47953 Fragaria vesca HOM05D006569 ORTHO05D007515 3.5e-21 106.3 220 32.7
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.5e-21 106.3 220 32.3
FAN14G1478 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.5e-21 106.3 220 32.3
QL02p053824 Quercus lobata HOM05D006569 ORTHO05D007515 4.6e-21 105.9 220 30.5
AL6G26150 Arabidopsis lyrata HOM05D006569 ORTHO05D007515 6.0e-21 105.5 219 32.0
CDE04G0154 Ceratophyllum demersum HOM05D006569 ORTHO05D007515 6.0e-21 105.5 187 35.8
MBI05_g10764_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 1.0e-20 104.8 204 35.3
Rhsim10G0036300 Rhododendron simsii HOM05D006569 ORTHO05D007515 2.3e-20 103.6 220 30.9
RcHm_v2.0_Chr2g0167491 Rosa chinensis HOM05D006569 ORTHO05D007515 2.3e-20 103.6 220 31.8
FAN02G1154 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.0e-20 103.2 220 32.3
HPP92_012798 Vanilla planifolia HOM05D006569 ORTHO05D007515 3.0e-20 103.2 229 34.9
FvH4_6g48150 Fragaria vesca HOM05D006569 ORTHO05D007515 3.9e-20 102.8 220 31.8
MBI05_g36424_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 1.1e-19 101.3 163 37.4
AT5G15280 Arabidopsis thaliana HOM05D006569 ORTHO05D007515 1.9e-19 100.5 219 30.6
AUR62034434 Chenopodium quinoa HOM05D006569 ORTHO05D007515 1.9e-19 100.5 257 28.8
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 2.5e-19 100.1 119 46.2
THA.LOC104822352 Tarenaya hassleriana HOM05D006569 ORTHO05D007515 2.5e-19 100.1 219 31.1
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 9.6e-19 98.2 223 30.0
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 9.6e-19 98.2 219 32.0
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 1.3e-18 97.8 91 47.3
CANSAT64G0455 Cannabis sativa HOM05D006569 ORTHO05D007515 1.6e-18 97.4 121 43.0
PSO832G0544 Papaver somniferum HOM05D006569 ORTHO05D007515 1.6e-18 97.4 101 49.5
Peaxi162Scf00011g00263 Petunia axillaris HOM05D006569 ORTHO05D007515 1.6e-18 97.4 191 33.0
Manes.01G092900 Manihot esculenta HOM05D006569 ORTHO05D007515 4.8e-18 95.9 220 30.0
PSO013G0141 Papaver somniferum HOM05D006569 ORTHO05D007515 8.1e-18 95.1 101 47.5
Sc10g0003480 Simmondsia chinensis HOM05D006569 ORTHO05D007515 8.1e-18 95.1 221 29.9
FAN05G0252 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.4e-17 94.4 110 45.5
Atru.chr8.291 Acer truncatum HOM05D006569 ORTHO05D007515 1.8e-17 94.0 220 30.9
Lalb_Chr15g0081471 Lupinus albus HOM05D006569 ORTHO05D007515 1.8e-17 94.0 220 31.4
BcaNung03317 Brassica carinata HOM05D006569 ORTHO05D007515 2.4e-17 93.6 117 42.7
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 2.4e-17 93.6 91 45.1
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 2.4e-17 93.6 91 48.4
MBI05_g41591_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 3.1e-17 93.2 121 44.6
BcaC03g13417 Brassica carinata HOM05D006569 ORTHO05D007515 4.0e-17 92.8 219 32.0
C02p07640 Brassica napus HOM05D006569 ORTHO05D007515 4.0e-17 92.8 219 32.0
BolC2t06696H Brassica oleracea HOM05D006569 ORTHO05D007515 4.0e-17 92.8 219 32.0
Aqoxy3G03442 Aquilegia oxysepala HOM05D006569 ORTHO05D007515 6.9e-17 92.0 91 46.2
GSVIVG01011442001 Vitis vinifera HOM05D006569 ORTHO05D007515 9.0e-17 91.7 91 45.1
arahy.Tifrunner.gnm1.ann1.80L4ZA Arachis hypogaea HOM05D006569 ORTHO05D007515 1.5e-16 90.9 216 30.1
EL10Ac2g03001 Beta vulgaris HOM05D006569 ORTHO05D007515 1.5e-16 90.9 91 41.8
A02p02990 Brassica napus HOM05D006569 ORTHO05D007515 1.5e-16 90.9 124 41.9
Glyma.18G093100 Glycine max HOM05D006569 ORTHO05D007515 1.5e-16 90.9 219 29.2
Zm00001eb005280 Zea mays HOM05D006569 ORTHO05D007515 1.5e-16 90.9 218 30.3
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 2.6e-16 90.1 161 34.8
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 3.4e-16 89.7 124 39.5
Ca_14754_v3 Cicer arietinum L. HOM05D006569 ORTHO05D007515 3.4e-16 89.7 91 44.0
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 3.4e-16 89.7 210 29.5
Lju41C9T14 Lonicera japonica HOM05D006569 ORTHO05D007515 4.5e-16 89.4 121 38.8
Lj6g0009481 Lotus japonicus HOM05D006569 ORTHO05D007515 4.5e-16 89.4 220 29.5
TWI60G0939 Tripterygium wilfordii HOM05D006569 ORTHO05D007515 4.5e-16 89.4 91 45.1
Eucgr.I01955 Eucalyptus grandis HOM05D006569 ORTHO05D007515 5.8e-16 89.0 222 29.3
Cfa007985 Carpinus fangiana HOM05D006569 ORTHO05D007515 7.6e-16 88.6 88 46.6
RcHm_v2.0_Chr2g0167571 Rosa chinensis HOM05D006569 ORTHO05D007515 9.9e-16 88.2 104 43.3
CSS0028247 Camellia sinensis var. sinensis HOM05D006569 ORTHO05D007515 1.3e-15 87.8 91 45.1
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 1.7e-15 87.4 237 30.4
FAN05G1756 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.7e-15 87.4 91 46.2
Prupe.3G265200 Prunus persica HOM05D006569 ORTHO05D007515 1.7e-15 87.4 91 45.1
PGSC0003DMG400025133 Solanum tuberosum HOM05D006569 ORTHO05D007515 1.7e-15 87.4 183 30.6
Medtr3g053000 Medicago truncatula HOM05D006569 ORTHO05D007515 2.2e-15 87.0 91 46.2
QL93p0100_0341 Quercus lobata HOM05D006569 ORTHO05D007515 2.2e-15 87.0 175 30.9
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 2.9e-15 86.7 90 45.6
Haze_14089 Corylus avellana HOM05D006569 ORTHO05D007515 2.9e-15 86.7 86 45.3
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 3.8e-15 86.3 91 44.0
QL02p057930 Quercus lobata HOM05D006569 ORTHO05D007515 3.8e-15 86.3 127 35.4
MELO3C023650.2 Cucumis melo HOM05D006569 ORTHO05D007515 4.9e-15 85.9 237 30.8
VMungo0540G0528 Vigna mungo HOM05D006569 ORTHO05D007515 4.9e-15 85.9 91 48.4
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 6.4e-15 85.5 90 45.6
Oeu010220.1 Olea europaea HOM05D006569 ORTHO05D007515 8.4e-15 85.1 75 54.7
Phvul.006G046500 Phaseolus vulgaris HOM05D006569 ORTHO05D007515 8.4e-15 85.1 91 47.3
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 1.4e-14 84.3 90 45.6
Ah.10g031720 Amaranthus hybridus HOM05D006569 ORTHO05D007515 1.4e-14 84.3 90 43.3
Cc07_g03540 Coffea canephora HOM05D006569 ORTHO05D007515 1.4e-14 84.3 219 27.4
Duzib264G1306 Durio zibethinus HOM05D006569 ORTHO05D007515 1.4e-14 84.3 91 41.8
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 1.4e-14 84.3 98 41.8
Psat5g175080 Pisum sativum HOM05D006569 ORTHO05D007515 3.2e-14 83.2 91 42.9
Nitab4.5_0003653g0010 Nicotiana tabacum HOM05D006569 ORTHO05D007515 4.2e-14 82.8 191 29.3
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 4.2e-14 82.8 91 44.0
Potri.017G086000 Populus trichocarpa HOM05D006569 ORTHO05D007515 5.4e-14 82.4 219 28.8
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 5.4e-14 82.4 90 45.6
TPR.G33795 Trifolium pratense HOM05D006569 ORTHO05D007515 7.1e-14 82.0 91 41.8
COL.COLO4_10330 Corchorus olitorius HOM05D006569 ORTHO05D007515 9.3e-14 81.6 108 36.1
Thhalv10012473m.g Eutrema salsugineum HOM05D006569 ORTHO05D007515 9.3e-14 81.6 89 43.8
QL08p010038 Quercus lobata HOM05D006569 ORTHO05D007515 1.6e-13 80.9 254 27.2
Ciclev10013587m.g Citrus clementina HOM05D006569 ORTHO05D007515 2.1e-13 80.5 91 46.2
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 7.9e-13 78.6 219 29.2
MSTRG.15471 Avicennia marina HOM05D006569 ORTHO05D007515 1.0e-12 78.2 83 47.0
DCAR_021661 Daucus carota HOM05D006569 ORTHO05D007515 1.0e-12 78.2 194 28.4
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 1.0e-12 78.2 88 44.3
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 1.0e-12 78.2 257 30.0
PGR004G0299 Punica granatum HOM05D006569 ORTHO05D007515 1.8e-12 77.4 119 34.5
Nitab4.5_0000212g0030 Nicotiana tabacum HOM05D006569 ORTHO05D007515 5.1e-12 75.9 214 27.6
Sed0017024 Sechium edule HOM05D006569 ORTHO05D007515 7.4e-11 72.0 86 40.7
ECA238G4289 Erigeron canadensis HOM05D006569 ORTHO05D007515 3.6e-10 69.7 88 37.5
FAN09G3888 Fragaria x ananassa HOM05D006569 ORTHO05D007515 4.8e-10 69.3 91 41.8
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 4.8e-10 69.3 85 35.3
CAN.G1103.13 Capsicum annuum HOM05D006569 ORTHO05D007515 4.5e-08 62.8 90 41.1
Thecc.04G085800 Theobroma cacao HOM05D006569 ORTHO05D007515 4.5e-08 62.8 46 58.7


User provided reference genes

Program Settings