Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 4.5e-59 231.1 121 100.0
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 8.6e-34 147.1 105 72.4
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 5.6e-33 144.4 105 70.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 7.3e-33 144.1 108 69.4
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.6e-32 142.9 106 69.8
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.6e-32 142.9 107 69.2
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.6e-32 141.7 104 71.2
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 6.1e-32 141.0 105 68.6
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 8.0e-32 140.6 105 69.5
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.0e-31 140.2 106 68.9
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.0e-31 140.2 104 70.2
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.8e-31 139.4 105 67.6
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.8e-31 139.4 104 70.2
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 2.3e-31 139.0 107 67.3
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 4.0e-31 138.3 104 68.3
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 5.2e-31 137.9 106 67.9
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 5.2e-31 137.9 104 68.3
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 5.2e-31 137.9 105 71.4
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 6.8e-31 137.5 105 68.6
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 8.9e-31 137.1 106 66.0
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 8.9e-31 137.1 105 66.7
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 1.5e-30 136.3 107 68.2
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.5e-30 136.3 107 66.4
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 1.5e-30 136.3 104 71.2
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.5e-30 136.3 113 62.8
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 2.6e-30 135.6 104 69.2
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.6e-30 135.6 109 63.3
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 3.4e-30 135.2 105 66.7
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 3.4e-30 135.2 122 64.8
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 4.4e-30 134.8 104 68.3
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 5.7e-30 134.4 118 64.4
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 7.5e-30 134.0 104 68.3
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 7.5e-30 134.0 104 68.3
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 9.8e-30 133.7 105 66.7
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.8e-30 133.7 106 65.1
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 9.8e-30 133.7 105 66.7
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.3e-29 133.3 105 64.8
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.3e-29 133.3 105 67.6
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-29 133.3 106 64.2
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.3e-29 133.3 105 66.7
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.7e-29 132.9 107 65.4
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 1.7e-29 132.9 118 62.7
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 2.2e-29 132.5 108 63.0
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.2e-29 132.5 105 64.8
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 2.9e-29 132.1 104 66.3
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 2.9e-29 132.1 106 65.1
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 3.7e-29 131.7 105 64.8
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.7e-29 131.7 107 63.6
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 4.9e-29 131.3 119 62.2
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 4.9e-29 131.3 107 65.4
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 6.4e-29 131.0 105 64.8
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 8.3e-29 130.6 104 63.5
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.4e-28 129.8 118 61.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.4e-28 129.8 105 64.8
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 1.8e-28 129.4 105 66.7
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.4e-28 129.0 105 64.8
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 2.4e-28 129.0 97 68.0
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 3.2e-28 128.6 102 67.6
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 3.2e-28 128.6 107 61.7
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 3.2e-28 128.6 107 62.6
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 4.1e-28 128.3 118 61.9
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 4.1e-28 128.3 104 64.4
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 5.4e-28 127.9 118 61.0
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 5.4e-28 127.9 105 64.8
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 7.0e-28 127.5 107 62.6
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 7.0e-28 127.5 105 63.8
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 9.2e-28 127.1 118 61.0
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 9.2e-28 127.1 118 61.0
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 9.2e-28 127.1 118 61.0
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 9.2e-28 127.1 118 61.0
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 9.2e-28 127.1 118 61.0
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.2e-27 126.7 117 60.7
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 2.0e-27 125.9 105 62.9
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 2.7e-27 125.6 104 64.4
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 2.7e-27 125.6 107 62.6
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 3.5e-27 125.2 118 59.3
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 4.6e-27 124.8 103 65.0
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 4.6e-27 124.8 108 61.1
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 1.0e-26 123.6 105 61.9
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.0e-26 123.6 105 61.9
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.3e-26 122.5 118 58.5
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.0e-26 122.1 130 53.8
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 3.0e-26 122.1 129 54.3
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 5.0e-26 121.3 118 60.2
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 6.6e-26 120.9 105 60.0
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.1e-24 115.9 94 66.0
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.8e-24 115.5 107 58.9
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.3e-23 112.5 81 74.1
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.0e-22 109.4 81 70.4
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.0e-22 109.4 83 69.9
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 2.0e-22 109.4 81 72.8
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.4e-22 108.2 83 68.7
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 7.5e-22 107.5 83 66.3
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 7.5e-22 107.5 84 66.7
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.3e-21 106.7 83 69.9
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.7e-21 106.3 91 64.8
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.7e-21 106.3 82 68.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 2.9e-21 105.5 94 63.8
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.9e-21 105.5 82 68.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 2.9e-21 105.5 84 65.5
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 8.3e-21 104.0 83 66.3
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.1e-20 103.6 81 69.1
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 1.4e-20 103.2 87 63.2
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.2e-20 102.1 81 65.4
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 2.3e-18 95.9 84 61.9
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.3e-17 92.0 66 68.2
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 1.2e-16 90.1 116 49.1
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.5e-14 83.2 78 55.1
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.0e-14 82.8 75 58.7
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.7e-13 79.7 108 48.1
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 4.9e-13 78.2 58 69.0
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 3.2e-12 75.5 87 48.3
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.2e-11 73.6 60 65.0
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.1e-11 72.8 55 65.5
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.5e-11 72.0 66 56.1
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.3e-10 69.3 50 70.0
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 7.3e-09 64.3 56 64.3


User provided reference genes

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