Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.7e-134 482.6 240 100.0
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 5.5e-133 477.6 240 99.2
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 3.0e-123 445.3 240 93.8
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 8.9e-75 284.3 247 59.1
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 9.8e-74 280.8 253 57.3
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 2.2e-73 279.6 253 57.3
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.4e-72 276.9 240 58.3
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 4.1e-72 275.4 250 56.4
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 2.7e-71 272.7 240 58.3
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 1.6e-68 263.5 240 55.0
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 2.1e-68 263.1 248 56.5
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 6.2e-68 261.5 237 55.7
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.4e-67 260.4 246 54.5
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 2.3e-67 259.6 248 54.8
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 3.1e-67 259.2 246 54.9
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 5.2e-67 258.5 251 52.6
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 8.9e-67 257.7 255 52.2
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.6e-66 256.1 246 54.9
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 2.6e-66 256.1 254 53.9
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.4e-66 255.8 246 54.9
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 3.4e-66 255.8 236 56.4
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 3.4e-66 255.8 245 53.1
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.4e-66 255.4 243 54.3
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.4e-66 255.4 243 54.3
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 5.8e-66 255.0 233 56.2
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 9.9e-66 254.2 247 52.2
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 1.3e-65 253.8 246 53.7
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 1.7e-65 253.4 247 53.0
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.7e-65 253.4 246 52.0
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 2.2e-65 253.1 246 51.6
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 3.8e-65 252.3 234 55.6
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.8e-65 252.3 241 53.1
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 4.9e-65 251.9 250 52.8
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 6.4e-65 251.5 238 55.0
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 6.4e-65 251.5 245 55.5
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 1.4e-64 250.4 243 53.9
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 1.4e-64 250.4 246 51.2
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.9e-64 250.0 250 52.8
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 1.9e-64 250.0 246 52.8
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 2.4e-64 249.6 238 53.4
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 4.1e-64 248.8 233 54.5
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 5.4e-64 248.4 250 51.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 5.4e-64 248.4 242 53.7
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 5.4e-64 248.4 247 53.0
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 7.1e-64 248.1 233 54.5
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 9.2e-64 247.7 234 54.3
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 9.2e-64 247.7 249 52.2
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 9.2e-64 247.7 233 54.1
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 9.2e-64 247.7 233 54.1
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 1.2e-63 247.3 231 55.0
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 1.6e-63 246.9 245 54.3
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 2.1e-63 246.5 246 52.0
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.1e-63 246.5 247 50.6
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 3.5e-63 245.7 240 52.5
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 4.6e-63 245.4 247 53.4
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 7.8e-63 244.6 239 53.6
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.0e-62 244.2 236 53.0
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.3e-62 243.8 246 50.4
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 2.3e-62 243.0 248 52.4
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 2.3e-62 243.0 249 50.2
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 5.1e-62 241.9 245 53.1
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 6.6e-62 241.5 236 52.5
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 6.6e-62 241.5 234 52.6
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 6.6e-62 241.5 247 51.0
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 8.6e-62 241.1 250 50.0
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.1e-61 240.7 247 51.0
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.1e-61 240.7 246 51.6
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 1.5e-61 240.4 246 49.6
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 1.5e-61 240.4 248 51.6
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.9e-61 240.0 238 53.4
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.9e-61 240.0 248 51.2
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 2.5e-61 239.6 236 52.1
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.5e-61 239.6 246 51.2
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.3e-61 239.2 224 54.5
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 3.3e-61 239.2 246 50.4
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 3.3e-61 239.2 237 51.9
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 4.3e-61 238.8 219 55.3
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 5.6e-61 238.4 234 53.4
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 7.3e-61 238.0 252 51.2
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 9.6e-61 237.7 234 52.6
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.6e-60 236.9 250 50.4
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.6e-60 236.9 247 49.8
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.6e-60 236.9 246 50.0
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.8e-60 236.1 221 54.8
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 3.6e-60 235.7 234 53.0
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 3.6e-60 235.7 238 51.7
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 3.6e-60 235.7 222 54.5
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.6e-60 235.7 247 49.8
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 4.7e-60 235.3 234 53.0
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 4.7e-60 235.3 249 49.0
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 6.2e-60 235.0 238 51.3
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 6.2e-60 235.0 234 52.1
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 8.1e-60 234.6 234 51.3
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.1e-59 234.2 247 48.6
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.1e-59 234.2 247 49.4
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 1.1e-59 234.2 236 51.3
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 1.4e-59 233.8 238 52.1
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.8e-59 233.4 236 50.8
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 3.1e-59 232.6 232 51.7
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 4.0e-59 232.3 234 51.3
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.2e-58 230.7 247 48.2
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.5e-58 230.3 247 47.8
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 2.6e-58 229.6 236 49.6
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 6.4e-57 224.9 246 45.9
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 6.4e-57 224.9 244 49.6
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 4.2e-56 222.2 244 50.8
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 4.6e-55 218.8 230 53.5
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 6.0e-55 218.4 219 50.2
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 7.6e-50 201.4 236 46.2
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 4.2e-48 195.7 211 49.3
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 2.1e-47 193.4 202 50.5
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 3.1e-43 179.5 227 40.5
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.6e-42 176.4 239 43.9
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 1.1e-40 171.0 266 38.0
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 4.0e-35 152.5 249 36.5
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 6.9e-35 151.8 222 39.6
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 7.6e-34 148.3 219 40.6
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 5.5e-32 142.1 107 61.7
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 3.9e-30 136.0 237 36.7
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 3.3e-29 132.9 238 35.3
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 9.7e-29 131.3 223 40.8
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 1.0e-17 94.7 118 42.4
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.3e-09 67.8 63 58.7
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 6.5e-09 65.5 236 25.8


User provided reference genes

Program Settings