Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 0.0e+00 1100.1 927 100.0
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.2e-299 1032.3 927 96.9
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.6e-50 205.7 754 43.6
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 6.5e-49 200.3 739 43.4
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 1.0e-41 176.4 745 41.5
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 1.7e-41 175.6 312 72.4
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 5.0e-41 174.1 315 69.8
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 5.0e-41 174.1 749 40.3
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 6.5e-41 173.7 730 40.8
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 1.9e-40 172.2 316 71.5
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 1.2e-39 169.5 744 40.5
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 3.6e-39 167.9 305 72.5
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 8.0e-39 166.8 254 80.7
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 8.0e-39 166.8 254 80.7
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 8.0e-39 166.8 255 80.8
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 3.0e-38 164.9 313 68.4
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 3.0e-38 164.9 310 71.3
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 3.0e-38 164.9 310 71.3
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 4.0e-38 164.5 314 68.8
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 3.4e-37 161.4 253 80.2
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 4.4e-37 161.0 313 67.4
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 9.8e-37 159.8 314 67.5
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 2.8e-36 158.3 311 68.2
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 4.9e-36 157.5 299 68.6
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 4.9e-36 157.5 167 50.3
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 4.9e-36 157.5 312 67.9
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 1.8e-35 155.6 250 80.8
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 1.8e-35 155.6 320 47.8
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 3.1e-35 154.8 247 81.8
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 3.1e-35 154.8 292 71.2
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 3.1e-35 154.8 304 68.4
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 3.1e-35 154.8 315 67.6
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 3.1e-35 154.8 260 77.3
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 5.4e-35 154.1 305 68.5
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 5.4e-35 154.1 305 68.5
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 5.4e-35 154.1 257 78.2
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 5.4e-35 154.1 315 67.9
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 7.0e-35 153.7 269 75.8
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 9.2e-35 153.3 257 78.2
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 1.2e-34 152.9 284 73.9
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 1.6e-34 152.5 314 67.5
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 4.5e-34 151.0 314 67.2
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 4.5e-34 151.0 302 62.3
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 4.5e-34 151.0 305 70.5
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 7.8e-34 150.2 313 68.1
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 1.0e-33 149.8 258 76.7
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.3e-33 149.4 260 76.2
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 1.7e-33 149.1 740 40.0
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 2.3e-33 148.7 260 76.5
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 5.0e-33 147.5 247 80.2
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 5.0e-33 147.5 270 73.3
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 6.6e-33 147.1 305 66.9
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 6.6e-33 147.1 691 39.7
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 8.6e-33 146.7 749 39.8
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 8.6e-33 146.7 745 39.5
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 1.1e-32 146.4 317 66.2
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 3.3e-32 144.8 247 79.4
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 4.3e-32 144.4 301 68.8
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 4.3e-32 144.4 305 67.2
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 5.6e-32 144.1 247 78.9
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 5.6e-32 144.1 247 78.9
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 1.2e-31 142.9 251 76.9
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 2.1e-31 142.1 284 71.5
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 2.1e-31 142.1 268 73.9
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 2.8e-31 141.7 270 71.9
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 3.6e-31 141.4 257 75.9
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 4.7e-31 141.0 263 73.0
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 8.0e-31 140.2 307 67.1
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 1.0e-30 139.8 247 78.9
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 1.0e-30 139.8 732 39.2
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.0e-30 139.8 284 71.8
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 1.4e-30 139.4 285 70.5
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 1.4e-30 139.4 285 70.5
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 1.4e-30 139.4 302 69.9
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 1.4e-30 139.4 259 75.7
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 1.8e-30 139.0 268 73.9
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.8e-30 139.0 318 64.5
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.3e-30 138.7 124 56.5
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 3.0e-30 138.3 307 66.8
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 5.2e-30 137.5 101 65.3
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 6.8e-30 137.1 247 77.7
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 6.8e-30 137.1 307 66.8
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 8.9e-30 136.7 247 77.3
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 8.9e-30 136.7 121 55.4
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 8.9e-30 136.7 250 78.4
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 1.2e-29 136.3 108 61.1
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 3.4e-29 134.8 138 52.2
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 4.4e-29 134.4 257 73.9
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 4.4e-29 134.4 107 58.9
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 4.4e-29 134.4 255 76.1
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 4.4e-29 134.4 112 59.8
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 1.3e-28 132.9 107 58.9
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 1.7e-28 132.5 252 75.8
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 2.2e-28 132.1 131 52.7
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 3.7e-28 131.3 258 74.0
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 4.9e-28 131.0 329 62.9
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 6.4e-28 130.6 742 38.4
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 8.3e-28 130.2 333 62.8
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 2.4e-27 128.6 239 79.5
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 9.2e-27 126.7 312 64.4
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 2.3e-25 122.1 724 38.3
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 1.5e-24 119.4 305 43.9
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 9.5e-24 116.7 218 83.5
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.4e-22 112.8 168 41.1
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 9.8e-21 106.7 139 41.0
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 3.7e-20 104.8 93 50.5
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 8.3e-20 103.6 99 48.5
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 3.2e-19 101.7 94 50.0
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 6.6e-17 94.0 143 37.1
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 6.2e-15 87.4 109 41.3
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 8.9e-14 83.6 101 42.6
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 4.4e-13 81.3 121 42.1
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 1.3e-09 69.7 115 37.4
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 6.8e-06 57.4 98 32.7
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 6.8e-06 57.4 39 64.1


User provided reference genes

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