Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.4e-33 145.6 68 100.0
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 4.8e-26 120.6 68 77.9
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.4e-25 119.0 60 85.0
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.0e-24 115.2 59 84.7
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 1.1e-22 109.4 53 88.7
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 3.6e-21 104.4 55 78.2
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 8.0e-21 103.2 53 81.1
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.6e-13 79.0 60 61.7
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 2.1e-13 78.6 60 63.3
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 2.7e-13 78.2 60 60.0
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 4.7e-13 77.4 60 61.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 4.7e-13 77.4 60 60.0
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 4.7e-13 77.4 60 60.0
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 6.1e-13 77.0 60 60.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 6.1e-13 77.0 60 60.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.0e-12 76.3 60 56.7
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 1.0e-12 76.3 60 60.0
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.0e-12 76.3 60 60.0
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.4e-12 75.9 60 60.0
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.4e-12 75.9 60 60.0
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.4e-12 75.9 60 61.7
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.8e-12 75.5 60 58.3
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.3e-12 75.1 60 58.3
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 3.0e-12 74.7 60 58.3
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 4.0e-12 74.3 60 58.3
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 4.0e-12 74.3 60 58.3
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.0e-12 74.3 60 58.3
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 4.0e-12 74.3 60 60.0
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 5.2e-12 73.9 60 58.3
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 6.8e-12 73.6 60 58.3
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 6.8e-12 73.6 60 58.3
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 8.8e-12 73.2 60 56.7
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 8.8e-12 73.2 58 60.3
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.2e-11 72.8 60 58.3
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.2e-11 72.8 59 55.9
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 1.5e-11 72.4 60 56.7
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 2.6e-11 71.6 59 52.5
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.6e-11 71.6 60 56.7
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 3.4e-11 71.2 60 58.3
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.4e-11 71.2 58 55.2
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.4e-11 71.2 60 56.7
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 4.4e-11 70.9 44 72.7
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.4e-11 70.9 60 55.0
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.4e-11 70.9 58 55.2
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 5.7e-11 70.5 60 55.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 5.7e-11 70.5 60 56.7
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 7.5e-11 70.1 60 53.3
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.5e-11 70.1 60 55.0
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.5e-11 70.1 60 56.7
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 53.3
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 53.3
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 53.3
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 55.0
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 55.0
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 53.3
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 9.8e-11 69.7 60 55.0
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 53.3
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 53.3
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 53.3
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 53.3
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 55.0
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 53.3
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 1.3e-10 69.3 60 53.3
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.7e-10 68.9 60 55.0
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.7e-10 68.9 60 55.0
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 2.2e-10 68.6 60 55.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.2e-10 68.6 60 55.0
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 2.8e-10 68.2 60 55.0
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 2.8e-10 68.2 60 53.3
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 3.7e-10 67.8 60 51.7
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 3.7e-10 67.8 69 50.7
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 4.8e-10 67.4 60 53.3
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 4.8e-10 67.4 58 55.2
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.8e-10 67.4 60 53.3
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 8.3e-10 66.6 61 54.1
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.1e-09 66.2 53 60.4
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.1e-09 66.2 60 53.3
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.8e-09 65.5 60 51.7
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.1e-09 64.7 53 56.6
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.1e-09 64.7 60 50.0
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.4e-09 63.9 53 56.6
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 9.1e-09 63.2 60 51.7
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.6e-08 62.4 54 55.6
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.7e-08 61.6 52 55.8
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 4.5e-08 60.8 52 53.8
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 7.7e-08 60.1 58 48.3
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 1.0e-07 59.7 53 50.9
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.3e-07 59.3 60 43.3
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 6.6e-07 57.0 53 50.9
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.5e-06 55.8 60 46.7
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.9e-06 55.5 46 56.5
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.9e-06 55.5 53 50.9
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 1.9e-06 55.5 53 49.1
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 2.5e-06 55.1 53 50.9
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 4.2e-06 54.3 58 48.3


User provided reference genes

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