Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 2.7e-302 1041.2 513 100.0
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.0e-220 769.2 517 73.5
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 1.7e-219 766.1 515 72.0
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 3.7e-219 765.0 513 73.7
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 1.2e-217 760.0 531 71.0
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 6.5e-216 754.2 494 74.7
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 8.5e-216 753.8 513 72.1
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 1.6e-214 749.6 518 71.6
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 2.1e-214 749.2 513 71.5
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 3.0e-213 745.3 519 71.5
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 1.1e-212 743.4 514 71.6
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 1.5e-212 743.0 514 70.8
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 4.8e-211 738.0 513 71.2
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 6.3e-211 737.6 513 70.8
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 2.4e-210 735.7 511 70.8
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 1.2e-209 733.4 516 70.0
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 1.5e-209 733.0 516 70.9
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 1.5e-209 733.0 512 71.9
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 2.0e-209 732.6 513 70.2
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 2.0e-209 732.6 547 66.7
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 5.9e-209 731.1 511 70.6
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 7.7e-209 730.7 518 69.9
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.3e-208 729.9 513 70.2
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 8.5e-208 727.2 510 70.2
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 2.5e-207 725.7 515 69.5
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 3.2e-207 725.3 509 70.3
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 7.2e-207 724.2 513 70.8
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.2e-206 723.4 512 69.9
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 4.7e-206 721.5 513 69.4
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 1.4e-205 719.9 513 69.2
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.3e-205 719.2 515 68.3
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 1.1e-204 716.8 510 69.2
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 1.5e-204 716.5 513 68.8
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 2.0e-204 716.1 519 69.0
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 2.0e-204 716.1 512 67.4
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 2.0e-204 716.1 515 68.2
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 2.6e-204 715.7 512 68.2
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 3.3e-204 715.3 515 68.3
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 5.7e-204 714.5 515 68.2
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 1.7e-203 713.0 513 69.6
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 4.8e-203 711.4 511 68.3
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 2.4e-202 709.1 513 68.8
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 5.3e-202 708.0 509 69.0
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 1.6e-201 706.4 517 67.9
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 1.6e-201 706.4 513 68.0
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 2.0e-201 706.1 513 68.4
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 2.6e-201 705.7 514 68.9
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.7e-200 703.0 600 60.5
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 2.2e-200 702.6 515 68.0
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 5.0e-200 701.4 515 68.0
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 6.5e-200 701.0 512 66.8
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 6.5e-200 701.0 511 68.5
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 1.1e-199 700.3 501 68.5
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 3.2e-199 698.7 513 68.0
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 1.2e-198 696.8 511 68.7
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 1.2e-198 696.8 515 68.0
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 4.7e-198 694.9 454 74.7
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 1.4e-197 693.3 515 66.2
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 1.8e-197 693.0 551 64.4
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 4.0e-197 691.8 551 64.4
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 8.8e-197 690.6 474 71.7
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 1.5e-196 689.9 518 65.8
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 3.4e-196 688.7 512 65.8
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 5.7e-196 688.0 512 65.8
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 9.8e-196 687.2 502 68.3
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 2.8e-195 685.6 480 69.8
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 2.8e-195 685.6 515 66.2
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 6.3e-195 684.5 516 66.9
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 8.3e-195 684.1 503 66.2
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.1e-194 683.7 503 66.4
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 5.4e-194 681.4 513 67.6
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 9.1e-194 680.6 509 67.2
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 1.2e-193 680.2 507 66.7
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 1.2e-193 680.2 508 66.7
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 2.7e-193 679.1 503 67.6
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 3.5e-193 678.7 506 67.0
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 7.7e-193 677.6 510 66.9
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 7.7e-193 677.6 515 65.8
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 1.0e-192 677.2 501 67.1
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 1.0e-192 677.2 501 67.7
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 1.3e-192 676.8 506 66.6
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 1.3e-192 676.8 506 66.8
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 1.7e-192 676.4 507 66.9
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 1.7e-192 676.4 507 66.9
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 2.2e-192 676.0 507 66.3
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 5.0e-192 674.9 518 66.4
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 6.5e-192 674.5 506 67.2
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 6.5e-192 674.5 481 69.0
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 6.5e-192 674.5 486 68.7
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 1.1e-191 673.7 507 66.9
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 1.5e-191 673.3 506 67.2
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 3.2e-191 672.2 506 66.8
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 4.2e-191 671.8 510 66.5
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 5.5e-191 671.4 506 66.6
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 5.5e-191 671.4 515 65.8
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 9.4e-191 670.6 506 66.8
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 3.6e-190 668.7 587 58.9
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 1.5e-188 663.3 463 70.6
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 2.0e-188 662.9 497 65.0
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 2.2e-187 659.4 491 67.6
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 1.8e-186 656.4 565 60.4
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 2.4e-186 656.0 510 64.7
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 4.1e-186 655.2 496 65.7
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 5.9e-185 651.4 512 63.3
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.0e-184 650.6 513 65.1
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.3e-184 649.4 513 64.5
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 3.8e-184 648.7 510 64.7
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 6.6e-184 647.9 495 65.7
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.2e-182 643.7 510 64.7
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 2.8e-182 642.5 513 63.0
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 1.2e-180 637.1 501 63.1
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 9.8e-180 634.0 528 62.1
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 1.3e-179 633.6 518 62.5
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.4e-178 629.4 513 63.2
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.4e-178 629.4 513 63.2
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 3.2e-178 629.0 450 68.7
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 4.1e-178 628.6 514 62.5
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 3.5e-177 625.5 471 66.2
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.9e-176 622.5 529 60.7
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 7.5e-172 607.8 453 66.0
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 4.1e-170 602.1 539 59.7
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 1.9e-167 593.2 514 59.5
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 4.0e-165 585.5 402 69.9
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 6.8e-165 584.7 405 69.6
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 1.5e-164 583.6 525 57.1
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 7.1e-162 574.7 549 56.3
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 3.3e-151 539.3 496 58.1
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 1.9e-146 523.5 420 62.6
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 8.7e-144 514.6 662 46.8
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 1.3e-136 490.7 457 56.9
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 4.0e-125 452.6 342 66.7
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 7.4e-119 431.8 273 74.4
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 1.4e-117 427.6 446 52.0
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 1.1e-109 401.4 279 71.0
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 8.5e-107 391.7 275 71.3
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 2.7e-97 360.1 245 75.5
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 2.6e-87 327.0 243 66.7
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 4.7e-81 306.2 257 61.9
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 1.0e-75 288.5 211 64.9
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 5.4e-69 266.2 220 60.9
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 5.0e-67 259.6 575 33.7
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 2.9e-62 243.8 501 35.1
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 9.5e-58 228.8 367 38.7
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 1.7e-43 181.4 137 67.9
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.3e-43 181.0 184 52.7
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.6e-41 174.9 121 71.1
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 3.3e-34 150.6 187 42.8
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 2.8e-33 147.5 110 67.3
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 8.4e-30 136.0 251 38.2
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.4e-29 134.4 251 37.8
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 5.4e-29 133.3 113 56.6
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 2.5e-26 124.4 68 79.4
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 6.0e-20 103.2 103 58.3
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 7.9e-20 102.8 179 32.4
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 3.4e-15 87.4 75 57.3
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 2.9e-14 84.3 113 45.1
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.0e-11 75.9 81 45.7
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 1.8e-11 75.1 221 28.1
PRCOL_00005868 Prasinoderma coloniale HOM05D000740 ORTHO05D007141 2.8e-09 67.8 121 33.1
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 6.2e-09 66.6 122 33.6
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.1e-08 65.9 36 83.3
SEGI_37303 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 3.1e-08 64.3 76 43.4
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 2.0e-07 61.6 61 52.5
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 3.4e-07 60.8 35 77.1


User provided reference genes

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