Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 3.2e-57 224.9 118 100.0
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 6.0e-32 141.0 119 66.4
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 7.8e-32 140.6 121 62.8
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 8.6e-31 137.1 120 65.8
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 8.6e-31 137.1 121 62.0
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.6e-31 137.1 119 63.0
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.6e-31 137.1 121 62.0
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 8.6e-31 137.1 121 61.2
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 1.9e-30 136.0 119 62.2
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.9e-30 136.0 120 64.2
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 2.5e-30 135.6 120 65.0
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 3.3e-30 135.2 119 64.7
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 3.3e-30 135.2 119 62.2
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 4.3e-30 134.8 118 64.4
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 9.6e-30 133.7 119 63.9
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.2e-29 133.3 119 64.7
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 1.2e-29 133.3 119 64.7
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 2.1e-29 132.5 120 60.0
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 2.1e-29 132.5 120 64.2
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 3.6e-29 131.7 121 65.3
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.7e-29 131.3 119 62.2
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 6.2e-29 131.0 120 61.7
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 8.1e-29 130.6 119 61.3
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.4e-28 129.8 120 62.5
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.4e-28 129.8 120 62.5
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.8e-28 129.4 117 59.8
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.8e-28 129.4 120 62.5
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 2.4e-28 129.0 118 61.9
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 3.1e-28 128.6 118 59.3
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 3.1e-28 128.6 117 62.4
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 4.0e-28 128.3 119 60.5
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 6.9e-28 127.5 88 75.0
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 6.9e-28 127.5 119 60.5
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 6.9e-28 127.5 120 60.0
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 6.9e-28 127.5 121 60.3
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 6.9e-28 127.5 120 60.8
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 8.9e-28 127.1 122 59.0
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 8.9e-28 127.1 119 60.5
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.2e-27 126.7 119 59.7
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.2e-27 126.7 117 60.7
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.2e-27 126.7 119 60.5
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.2e-27 126.7 119 60.5
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.2e-27 126.7 123 61.8
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.5e-27 126.3 119 62.2
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.5e-27 126.3 120 59.2
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 2.0e-27 125.9 120 60.0
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 3.4e-27 125.2 73 86.3
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 4.4e-27 124.8 117 59.8
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 5.8e-27 124.4 119 58.8
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 5.8e-27 124.4 119 60.5
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.8e-27 124.4 91 72.5
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 5.8e-27 124.4 119 60.5
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 7.6e-27 124.0 123 60.2
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 7.6e-27 124.0 119 57.1
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 7.6e-27 124.0 119 59.7
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 7.6e-27 124.0 118 60.2
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 9.9e-27 123.6 120 60.0
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.3e-26 123.2 119 61.3
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 1.7e-26 122.9 118 60.2
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.7e-26 122.9 119 58.0
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.2e-26 122.5 119 60.5
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.9e-26 122.1 118 55.1
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 2.9e-26 122.1 72 81.9
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.8e-26 121.7 117 59.0
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 3.8e-26 121.7 117 58.1
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.9e-26 121.3 119 58.8
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 4.9e-26 121.3 119 60.5
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 4.9e-26 121.3 120 58.3
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 4.9e-26 121.3 94 69.1
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 6.4e-26 120.9 73 83.6
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 6.4e-26 120.9 119 58.8
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 6.4e-26 120.9 120 59.2
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 8.4e-26 120.6 119 58.0
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 8.4e-26 120.6 119 56.3
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.1e-25 120.2 116 59.5
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.1e-25 120.2 72 80.6
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.1e-25 120.2 95 67.4
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.1e-25 120.2 91 68.1
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.1e-25 120.2 71 81.7
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.9e-25 119.4 118 55.1
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.9e-25 119.4 71 83.1
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.9e-25 119.4 120 55.8
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.9e-25 119.4 119 52.1
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.9e-25 119.4 118 57.6
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.4e-25 119.0 118 59.3
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 3.2e-25 118.6 88 72.7
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 3.2e-25 118.6 88 72.7
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 3.2e-25 118.6 129 53.5
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 3.2e-25 118.6 120 54.2
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 3.2e-25 118.6 116 56.0
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 4.2e-25 118.2 120 56.7
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 5.4e-25 117.9 117 56.4
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 5.4e-25 117.9 118 58.5
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 5.4e-25 117.9 120 60.0
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 7.1e-25 117.5 91 67.0
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 9.3e-25 117.1 125 56.0
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 5.1e-23 111.3 144 50.0
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 4.3e-22 108.2 60 90.0
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 7.3e-22 107.5 114 50.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 9.6e-22 107.1 110 58.2
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.6e-21 106.3 105 59.0
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 2.1e-21 105.9 59 88.1
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.8e-21 104.8 59 86.4
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 4.8e-21 104.8 59 86.4
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 1.8e-20 102.8 59 84.7
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 6.9e-20 100.9 79 65.8
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.5e-19 99.8 86 60.5
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.5e-19 99.8 116 54.3
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 1.5e-19 99.8 158 37.3
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 1.5e-19 99.8 58 84.5
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.0e-19 99.4 111 53.2
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 3.8e-18 95.1 97 52.6
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.2e-16 90.1 130 40.8
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.3e-13 80.1 121 42.1
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 5.3e-12 74.7 58 60.3
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 2.6e-11 72.4 72 47.2
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.7e-10 69.7 120 43.3
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 2.7e-08 62.4 79 36.7


User provided reference genes

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