Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0906G001 Amborella trichopoda HOM05D004493 ORTHO05D005117 0.0e+00 1335.9 731 100.0
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 2.0e-279 965.7 915 67.4
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 6.7e-41 173.3 959 27.9
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 4.5e-37 160.6 894 27.5
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 4.2e-35 154.1 883 27.7
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 4.7e-34 150.6 889 27.2
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 1.0e-33 149.4 917 27.3
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 7.5e-32 143.3 856 27.7
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 3.7e-31 141.0 854 26.9
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 6.3e-31 140.2 870 26.8
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.2e-29 136.0 750 27.2
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 2.0e-29 135.2 827 26.7
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.7e-29 134.8 845 26.5
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 5.9e-29 133.7 845 25.8
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.0e-28 132.9 253 35.6
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 1.0e-28 132.9 895 27.7
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 2.3e-28 131.7 243 37.9
COL.COLO4_35068 Corchorus olitorius HOM05D004493 ORTHO05D005117 6.5e-28 130.2 817 26.6
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 4.2e-27 127.5 460 27.4
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 9.5e-27 126.3 238 37.8
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 1.6e-26 125.6 424 29.5
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 1.6e-26 125.6 652 26.4
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 2.1e-26 125.2 469 28.8
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 2.1e-26 125.2 919 26.6
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 6.1e-26 123.6 898 26.2
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 6.1e-26 123.6 614 27.9
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 6.1e-26 123.6 272 35.3
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 8.0e-26 123.2 840 26.0
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 1.0e-25 122.9 232 36.2
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 1.4e-25 122.5 893 26.5
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.8e-25 122.1 249 38.2
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 1.5e-24 119.0 837 26.0
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 1.5e-24 119.0 897 26.1
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 1.5e-24 119.0 897 26.1
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 1.5e-24 119.0 916 26.6
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 1.5e-24 119.0 813 26.2
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 2.0e-24 118.6 616 27.8
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 2.0e-24 118.6 925 25.8
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 2.6e-24 118.2 241 35.7
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 3.4e-24 117.9 610 24.9
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 7.5e-24 116.7 838 26.1
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 4.9e-23 114.0 227 35.2
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 4.9e-23 114.0 726 25.2
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 6.3e-23 113.6 706 27.1
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 8.3e-23 113.2 878 24.7
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 8.3e-23 113.2 928 24.6
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 1.1e-22 112.8 591 28.4
VMungo0720G0327 Vigna mungo HOM05D004493 ORTHO05D005117 1.4e-22 112.5 231 35.9
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 1.8e-22 112.1 229 34.1
Nitab4.5_0000075g0170 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.8e-22 112.1 295 32.2
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 2.4e-22 111.7 614 27.7
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 7.0e-22 110.2 242 33.5
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 9.2e-22 109.8 850 25.3
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 1.2e-21 109.4 631 27.7
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.2e-21 109.4 910 25.3
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 2.0e-21 108.6 909 25.6
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 2.0e-21 108.6 825 26.1
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 2.0e-21 108.6 835 25.0
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 4.5e-21 107.5 224 36.2
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 1.7e-20 105.5 357 29.1
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 1.7e-20 105.5 235 34.0
SEGI_27502 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 2.3e-20 105.1 226 38.9
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 3.8e-20 104.4 851 25.7
Gohir.A08G083000 Gossypium hirsutum HOM05D004493 ORTHO05D005117 5.0e-20 104.0 930 25.4
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 5.0e-20 104.0 761 26.1
Eucgr.J01744 Eucalyptus grandis HOM05D004493 ORTHO05D005117 6.6e-20 103.6 904 25.6
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 6.6e-20 103.6 628 26.4
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 1.1e-19 102.8 859 27.1
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 2.5e-19 101.7 859 24.3
CDE02G1557 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 4.3e-19 100.9 791 25.3
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 4.3e-19 100.9 574 25.3
Peaxi162Scf00186g00168 Petunia axillaris HOM05D004493 ORTHO05D005117 5.6e-19 100.5 787 25.4
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 9.5e-19 99.8 895 24.1
Hund28035 Selenicereus undatus HOM05D004493 ORTHO05D005117 9.5e-19 99.8 732 24.9
Hund28037 Selenicereus undatus HOM05D004493 ORTHO05D005117 9.5e-19 99.8 732 24.9
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 9.5e-19 99.8 723 26.3
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 1.2e-18 99.4 864 26.5
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 6.1e-18 97.1 715 25.5
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 3.0e-17 94.7 853 25.1
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 3.0e-17 94.7 156 37.8
Ah.06g182280 Amaranthus hybridus HOM05D004493 ORTHO05D005117 1.5e-16 92.4 740 25.4
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 2.0e-16 92.0 648 25.5
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 2.6e-16 91.7 414 27.8
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 2.6e-16 91.7 929 24.1
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 5.8e-16 90.5 859 24.7
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 2.2e-15 88.6 948 24.5
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 4.9e-15 87.4 813 24.5
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 1.1e-14 86.3 783 25.3
Sc06g0004140 Simmondsia chinensis HOM05D004493 ORTHO05D005117 3.2e-14 84.7 805 24.6
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 4.1e-14 84.3 897 24.6
Lj2A889T20 Lonicera japonica HOM05D004493 ORTHO05D005117 4.1e-14 84.3 170 35.3
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 3.0e-12 78.2 854 25.4
Solyc02g032380.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.5e-11 75.9 214 31.3
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 2.5e-11 75.1 904 23.0
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 3.3e-11 74.7 872 23.1
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 9.5e-11 73.2 922 23.5
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 8.0e-10 70.1 849 23.6
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 5.2e-09 67.4 371 24.8
Potri.001G001201 Populus trichocarpa HOM05D004493 ORTHO05D005117 1.5e-08 65.9 185 32.4
MSTRG.12811 Avicennia marina HOM05D004493 ORTHO05D005117 9.8e-08 63.2 116 42.2
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 1.4e-06 59.3 213 26.8


User provided reference genes

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