Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 5.3e-63 244.2 125 100.0
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 5.9e-62 240.7 125 97.6
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 3.2e-44 181.8 111 79.3
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 9.4e-44 180.3 111 78.4
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 2.1e-43 179.1 112 76.8
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 2.1e-43 179.1 124 71.0
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 2.7e-43 178.7 115 73.9
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 4.7e-43 177.9 112 74.1
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 8.0e-43 177.2 114 73.7
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.0e-42 176.8 115 72.2
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 1.0e-42 176.8 114 73.7
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 1.0e-42 176.8 111 75.7
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 1.8e-42 176.0 121 70.2
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 2.3e-42 175.6 127 69.3
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 3.0e-42 175.3 125 68.0
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 4.0e-42 174.9 111 74.8
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 5.2e-42 174.5 115 72.2
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 6.8e-42 174.1 111 73.9
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 6.8e-42 174.1 130 66.2
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 6.8e-42 174.1 114 72.8
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 1.2e-41 173.3 110 73.6
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 1.2e-41 173.3 112 75.0
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 2.0e-41 172.6 111 72.1
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 2.0e-41 172.6 113 71.7
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 2.0e-41 172.6 114 71.9
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 3.4e-41 171.8 112 72.3
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 4.4e-41 171.4 111 71.2
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 5.7e-41 171.0 111 73.0
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 5.7e-41 171.0 111 73.9
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 5.7e-41 171.0 111 73.0
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 5.7e-41 171.0 110 71.8
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 7.5e-41 170.6 115 69.6
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 1.3e-40 169.9 111 70.3
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 1.3e-40 169.9 110 71.8
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 1.3e-40 169.9 111 70.3
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 1.3e-40 169.9 111 73.9
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.7e-40 169.5 111 71.2
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.7e-40 169.5 110 70.9
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 2.2e-40 169.1 111 71.2
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 2.2e-40 169.1 108 75.9
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.2e-40 169.1 108 75.9
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 2.2e-40 169.1 114 68.4
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 2.2e-40 169.1 111 70.3
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 2.2e-40 169.1 111 70.3
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 2.2e-40 169.1 111 72.1
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 2.8e-40 168.7 110 70.9
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 2.8e-40 168.7 115 67.8
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 2.8e-40 168.7 111 69.4
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 2.8e-40 168.7 108 75.0
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.7e-40 168.3 108 75.9
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 3.7e-40 168.3 118 69.5
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 4.8e-40 167.9 113 69.0
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 4.8e-40 167.9 115 68.7
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 4.8e-40 167.9 111 69.4
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 4.8e-40 167.9 124 67.7
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 4.8e-40 167.9 117 70.1
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 6.3e-40 167.5 115 68.7
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 6.3e-40 167.5 115 68.7
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 6.3e-40 167.5 124 66.9
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 6.3e-40 167.5 108 75.0
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 6.3e-40 167.5 108 75.0
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 6.3e-40 167.5 111 72.1
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 8.3e-40 167.2 110 70.9
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 8.3e-40 167.2 108 74.1
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 1.4e-39 166.4 121 65.3
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 1.4e-39 166.4 130 63.1
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 1.8e-39 166.0 124 63.7
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 1.8e-39 166.0 111 71.2
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.8e-39 166.0 118 68.6
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 2.4e-39 165.6 119 66.4
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 3.1e-39 165.2 110 69.1
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 3.1e-39 165.2 110 69.1
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 3.1e-39 165.2 110 69.1
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 5.4e-39 164.5 118 66.9
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 7.0e-39 164.1 115 67.0
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 7.0e-39 164.1 111 67.6
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 7.0e-39 164.1 111 67.6
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 7.0e-39 164.1 111 67.6
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 7.0e-39 164.1 111 67.6
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 7.0e-39 164.1 111 67.6
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 7.0e-39 164.1 110 70.9
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 9.1e-39 163.7 112 67.9
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 9.1e-39 163.7 110 69.1
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 1.2e-38 163.3 110 68.2
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 1.2e-38 163.3 138 63.0
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 2.0e-38 162.5 111 68.5
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 2.7e-38 162.2 111 68.5
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 2.7e-38 162.2 111 67.6
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 5.9e-38 161.0 114 64.0
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 5.9e-38 161.0 111 67.6
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 7.7e-38 160.6 111 67.6
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 1.0e-37 160.2 111 67.6
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 1.0e-37 160.2 111 65.8
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 1.3e-37 159.8 111 64.9
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 1.7e-37 159.5 109 67.0
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 1.7e-37 159.5 126 59.5
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 1.7e-37 159.5 111 65.8
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 3.8e-37 158.3 115 63.5
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 6.5e-37 157.5 112 67.0
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 6.5e-37 157.5 115 63.5
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 8.6e-37 157.1 110 64.5
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 7.2e-36 154.1 116 68.1
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 1.2e-35 153.3 109 62.4
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.6e-35 152.9 111 66.7
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 1.6e-35 152.9 111 67.6
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 3.6e-35 151.8 114 64.0
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 6.8e-34 147.5 109 65.1
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 4.4e-33 144.8 111 63.1
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 7.5e-33 144.1 114 65.8
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 1.7e-32 142.9 111 63.1
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 8.3e-32 140.6 106 61.3
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.7e-30 135.6 123 55.3
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 4.0e-26 121.7 89 66.3
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.2e-25 120.2 109 60.6
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.0e-25 119.4 89 65.2
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 4.9e-24 114.8 89 62.9
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 2.0e-22 109.4 91 61.5
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 4.3e-20 101.7 68 70.6
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.4e-18 96.7 114 44.7
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 5.2e-18 94.7 114 43.9
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 5.8e-17 91.3 66 65.2
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 7.5e-17 90.9 103 45.6
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 1.1e-15 87.0 56 71.4
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 1.4e-15 86.7 66 57.6
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 2.1e-14 82.8 113 38.9
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 3.0e-13 79.0 52 67.3
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.1e-12 77.0 45 80.0
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.2e-09 67.0 54 59.3
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 4.9e-08 61.6 51 52.9
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 4.1e-07 58.5 65 46.2
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.6e-06 56.6 42 59.5
HanXRQChr04g0110971 Helianthus annuus HOM05D000316 ORTHO05D012803 1.6e-06 56.6 63 54.0


User provided reference genes

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