Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0853G001 Amborella trichopoda HOM05D006394 ORTHO05D008057 2.8e-45 184.9 91 100.0
MBI05_g15342_MAGBIO Magnolia biondii HOM05D006394 ORTHO05D008057 1.6e-16 89.4 92 55.4
Nn6g32361 Nelumbo nucifera HOM05D006394 ORTHO05D008057 6.1e-16 87.4 92 50.0
Aqoxy2G01815 Aquilegia oxysepala HOM05D006394 ORTHO05D008057 1.0e-15 86.7 90 53.3
TAR133G0002 Trochodendron aralioides HOM05D006394 ORTHO05D008057 8.8e-15 83.6 92 54.3
Haze_03772 Corylus avellana HOM05D006394 ORTHO05D008057 3.1e-12 75.1 91 50.5
TAR365G0979 Trochodendron aralioides HOM05D006394 ORTHO05D008057 5.3e-12 74.3 91 49.5
CiPaw.07G057900 Carya illinoinensis HOM05D006394 ORTHO05D008057 1.2e-11 73.2 91 48.4
QL06p032614 Quercus lobata HOM05D006394 ORTHO05D008057 1.3e-10 69.7 91 47.3
PSO541G5117 Papaver somniferum HOM05D006394 ORTHO05D008057 1.7e-10 69.3 91 49.5
Gohir.D11G183600 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.9e-10 68.6 91 45.1
Gorai.007G195500 Gossypium raimondii HOM05D006394 ORTHO05D008057 2.9e-10 68.6 91 45.1
GSVIVG01018789001 Vitis vinifera HOM05D006394 ORTHO05D008057 5.0e-10 67.8 91 48.4
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 6.5e-10 67.4 92 46.7
Peaxi162Scf00034g02720 Petunia axillaris HOM05D006394 ORTHO05D008057 6.5e-10 67.4 91 44.0
Nitab4.5_0000438g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 1.4e-09 66.2 92 45.7
Rhsim10G0213000 Rhododendron simsii HOM05D006394 ORTHO05D008057 1.4e-09 66.2 93 43.0
Gohir.A11G175800 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.5e-09 65.5 91 44.0
MELO3C007895.2 Cucumis melo HOM05D006394 ORTHO05D008057 4.2e-09 64.7 91 44.0
Potri.005G115100 Populus trichocarpa HOM05D006394 ORTHO05D008057 4.2e-09 64.7 91 44.0
Sabra05G0094200 Salix brachista HOM05D006394 ORTHO05D008057 5.5e-09 64.3 91 45.1
Actinidia22984 Actinidia chinensis HOM05D006394 ORTHO05D008057 9.4e-09 63.5 92 44.6
ClCG01G020230 Citrullus lanatus HOM05D006394 ORTHO05D008057 9.4e-09 63.5 91 46.2
Actinidia28701 Actinidia chinensis HOM05D006394 ORTHO05D008057 1.2e-08 63.2 94 44.7
CsaV3_6G047020 Cucumis sativus L. HOM05D006394 ORTHO05D008057 2.1e-08 62.4 91 44.0
Actinidia31001 Actinidia chinensis HOM05D006394 ORTHO05D008057 2.7e-08 62.0 94 44.7
Duzib264G0144 Durio zibethinus HOM05D006394 ORTHO05D008057 2.7e-08 62.0 91 42.9
Nitab4.5_0006119g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 3.6e-08 61.6 93 43.0
Lj2C467T3 Lonicera japonica HOM05D006394 ORTHO05D008057 4.7e-08 61.2 92 45.7
MD15G1246300 Malus domestica HOM05D006394 ORTHO05D008057 4.7e-08 61.2 92 45.7
Thecc.01G019800 Theobroma cacao HOM05D006394 ORTHO05D008057 4.7e-08 61.2 91 40.7
Sopen03g006350 Solanum pennellii HOM05D006394 ORTHO05D008057 7.9e-08 60.5 92 44.6
Ciclev10025906m.g Citrus clementina HOM05D006394 ORTHO05D008057 1.0e-07 60.1 91 41.8
Dinv33624 Davidia involucrata HOM05D006394 ORTHO05D008057 1.4e-07 59.7 69 49.3
Glyma.16G129000 Glycine max HOM05D006394 ORTHO05D008057 1.4e-07 59.7 91 40.7
Os04g0110600 Oryza sativa ssp. japonica HOM05D006394 ORTHO05D008057 1.4e-07 59.7 92 41.3
Sed0000291 Sechium edule HOM05D006394 ORTHO05D008057 1.4e-07 59.7 91 42.9
CANSAT01G2157 Cannabis sativa HOM05D006394 ORTHO05D008057 1.8e-07 59.3 91 41.8
MD02G1133300 Malus domestica HOM05D006394 ORTHO05D008057 1.8e-07 59.3 92 46.7
Solyc03g033560.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 1.8e-07 59.3 92 43.5
Zm00001eb411540 Zea mays HOM05D006394 ORTHO05D008057 1.8e-07 59.3 69 50.7
CSS0039773 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 2.3e-07 58.9 94 44.7
Gohir.D10G090000 Gossypium hirsutum HOM05D006394 ORTHO05D008057 3.0e-07 58.5 91 41.8
Gorai.011G098800 Gossypium raimondii HOM05D006394 ORTHO05D008057 3.0e-07 58.5 91 41.8
vmacro21917 Vaccinium macrocarpon HOM05D006394 ORTHO05D008057 3.0e-07 58.5 93 39.8
Cpa.g.sc6.241 Carica papaya HOM05D006394 ORTHO05D008057 3.9e-07 58.2 91 39.6
Prupe.7G167400 Prunus persica HOM05D006394 ORTHO05D008057 3.9e-07 58.2 92 42.4
Zm00001eb418470 Zea mays HOM05D006394 ORTHO05D008057 3.9e-07 58.2 69 49.3
CDE02G2139 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 6.7e-07 57.4 93 47.3
Cc07_g10630 Coffea canephora HOM05D006394 ORTHO05D008057 6.7e-07 57.4 90 41.1
PGSC0003DMG400022563 Solanum tuberosum HOM05D006394 ORTHO05D008057 6.7e-07 57.4 92 42.4
DCAR_032392 Daucus carota HOM05D006394 ORTHO05D008057 2.0e-06 55.8 92 45.7
Gohir.A10G098200 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.0e-06 55.8 91 40.7
Manes.01G145300 Manihot esculenta HOM05D006394 ORTHO05D008057 2.6e-06 55.5 91 41.8
PSO675G2528 Papaver somniferum HOM05D006394 ORTHO05D008057 2.6e-06 55.5 91 41.8
Hund16487 Selenicereus undatus HOM05D006394 ORTHO05D008057 3.3e-06 55.1 92 41.3
TWI53G2075 Tripterygium wilfordii HOM05D006394 ORTHO05D008057 3.3e-06 55.1 90 36.7
RcHm_v2.0_Chr2g0099531 Rosa chinensis HOM05D006394 ORTHO05D008057 5.7e-06 54.3 91 41.8
VMungo0251G2040 Vigna mungo HOM05D006394 ORTHO05D008057 5.7e-06 54.3 91 37.4
Zm00001eb089410 Zea mays HOM05D006394 ORTHO05D008057 5.7e-06 54.3 69 49.3
Phvul.003G262300 Phaseolus vulgaris HOM05D006394 ORTHO05D008057 9.7e-06 53.5 91 37.4


User provided reference genes

Program Settings