Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 1.4e-110 402.9 200 100.0
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 3.6e-45 185.7 189 52.4
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 2.3e-44 183.0 189 51.9
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 3.0e-44 182.6 191 51.3
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 2.0e-43 179.9 189 50.8
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 2.6e-43 179.5 193 48.7
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 2.6e-43 179.5 189 49.7
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 3.4e-43 179.1 190 50.5
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 3.4e-43 179.1 189 49.7
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 3.4e-43 179.1 191 50.3
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 3.4e-43 179.1 191 50.3
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 4.4e-43 178.7 189 49.7
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 4.4e-43 178.7 189 50.8
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 7.5e-43 177.9 192 49.0
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 7.5e-43 177.9 190 49.5
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 9.8e-43 177.6 191 48.7
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 9.8e-43 177.6 189 48.1
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 9.8e-43 177.6 190 48.9
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.3e-42 177.2 189 49.2
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.7e-42 176.8 189 47.1
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 2.2e-42 176.4 198 46.0
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 2.2e-42 176.4 189 47.1
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 2.8e-42 176.0 196 48.5
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 2.8e-42 176.0 196 48.0
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 3.7e-42 175.6 191 51.3
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 4.9e-42 175.3 189 48.7
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 4.9e-42 175.3 189 47.1
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 6.3e-42 174.9 193 48.2
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 1.1e-41 174.1 195 48.7
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 1.1e-41 174.1 189 48.1
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.8e-41 173.3 198 45.5
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.8e-41 173.3 189 50.3
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.8e-41 173.3 189 46.6
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 1.8e-41 173.3 189 48.7
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 2.4e-41 172.9 198 45.5
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 2.4e-41 172.9 191 49.2
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 2.4e-41 172.9 191 49.2
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.4e-41 172.9 190 46.3
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 2.4e-41 172.9 199 46.7
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 3.1e-41 172.6 189 49.2
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 3.1e-41 172.6 194 47.9
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 3.1e-41 172.6 189 47.6
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 5.4e-41 171.8 189 48.7
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 5.4e-41 171.8 189 48.7
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 7.0e-41 171.4 198 44.9
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 7.0e-41 171.4 189 48.7
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 7.0e-41 171.4 193 48.2
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 1.2e-40 170.6 194 44.8
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 2.7e-40 169.5 193 46.6
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 2.7e-40 169.5 190 48.4
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 2.7e-40 169.5 196 45.4
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 3.5e-40 169.1 193 48.7
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 4.5e-40 168.7 189 47.6
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 5.9e-40 168.3 190 44.7
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 5.9e-40 168.3 193 44.6
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 5.9e-40 168.3 190 44.7
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 5.9e-40 168.3 190 44.7
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 5.9e-40 168.3 193 44.6
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 5.9e-40 168.3 193 48.7
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 5.9e-40 168.3 193 48.7
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 1.0e-39 167.5 190 45.8
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 1.0e-39 167.5 184 47.3
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.0e-39 167.5 191 45.5
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 1.3e-39 167.2 190 46.8
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 1.7e-39 166.8 190 44.7
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.7e-39 166.8 194 46.9
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 2.9e-39 166.0 193 46.1
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 8.6e-39 164.5 189 46.0
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 8.6e-39 164.5 190 46.3
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 8.6e-39 164.5 185 47.0
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 1.1e-38 164.1 190 44.2
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 2.5e-38 162.9 191 46.1
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 4.3e-38 162.2 190 46.8
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 4.3e-38 162.2 179 48.6
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 4.3e-38 162.2 182 47.8
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 7.3e-38 161.4 191 45.5
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 7.3e-38 161.4 191 45.5
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 9.5e-38 161.0 190 44.2
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 3.6e-37 159.1 207 41.1
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 6.1e-37 158.3 175 48.0
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 6.1e-37 158.3 193 44.0
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 8.0e-37 157.9 193 43.5
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.4e-36 157.1 190 46.8
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 1.8e-36 156.8 194 43.3
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 3.0e-36 156.0 181 45.3
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 8.9e-36 154.5 182 46.7
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.5e-35 153.7 193 43.0
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.6e-35 152.9 177 45.8
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.8e-33 146.7 192 43.8
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 3.2e-33 146.0 207 44.9
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 3.5e-32 142.5 154 48.1
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 7.8e-32 141.4 207 43.5
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.7e-31 140.2 197 41.1
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 9.5e-30 134.4 157 47.1
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 8.0e-29 131.3 154 46.1
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 6.8e-28 128.3 154 46.8
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 6.8e-28 128.3 152 46.1
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 3.4e-27 125.9 171 39.8
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 6.4e-26 121.7 156 44.2
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 8.3e-26 121.3 92 63.0
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 4.1e-25 119.0 152 44.7
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 4.6e-24 115.5 152 44.1
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 4.6e-24 115.5 146 45.2
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 6.8e-20 101.7 153 39.2
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 1.1e-17 94.4 128 44.5
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 3.2e-17 92.8 195 35.4
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.3e-15 87.4 176 34.1
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 1.1e-14 84.3 135 35.6
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 1.5e-14 84.0 175 32.6
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 9.5e-14 81.3 189 29.1
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 1.2e-13 80.9 171 33.9
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 9.2e-09 64.7 124 32.3
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 1.3e-07 60.8 48 54.2
Zm00001eb177740 Zea mays HOM05D002799 ORTHO05D008889 8.7e-07 58.2 36 72.2
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 9.6e-06 54.7 93 35.5


User provided reference genes

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