Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 5.8e-161 570.9 290 100.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 5.7e-108 394.8 277 70.8
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 5.3e-106 388.3 277 70.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 2.2e-104 382.9 277 67.5
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.5e-104 380.9 277 66.8
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.5e-104 380.9 277 66.8
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.1e-103 380.6 282 67.0
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 4.2e-103 378.6 277 68.6
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.6e-102 376.7 271 66.8
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 2.1e-102 376.3 277 65.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 4.6e-102 375.2 277 65.0
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.6e-102 375.2 277 65.0
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 6.1e-102 374.8 277 66.1
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-101 374.0 277 65.0
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 5.1e-101 371.7 277 66.1
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.7e-101 370.9 277 63.9
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 1.5e-100 370.2 277 65.0
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.9e-100 369.8 277 67.5
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.3e-100 369.0 277 64.6
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 3.3e-100 369.0 278 64.4
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 5.7e-100 368.2 277 64.3
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 7.4e-100 367.9 277 63.9
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 7.4e-100 367.9 277 65.3
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 7.4e-100 367.9 279 63.8
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.3e-99 367.1 277 64.3
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-99 366.7 276 64.1
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.8e-99 365.9 277 63.5
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 4.8e-99 365.2 270 65.9
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 6.3e-99 364.8 277 63.5
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 6.3e-99 364.8 277 63.5
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.8e-98 363.2 277 63.5
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.4e-98 362.8 293 63.1
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 5.3e-98 361.7 270 64.8
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 9.0e-98 360.9 278 63.3
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.5e-97 360.1 294 60.9
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 4.5e-97 358.6 281 61.9
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 5.9e-97 358.2 270 64.4
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 5.9e-97 358.2 277 63.5
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.0e-96 357.5 277 65.0
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-96 357.5 312 57.7
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.0e-96 357.5 277 63.5
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 2.2e-96 356.3 278 64.4
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.2e-96 356.3 278 64.4
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 2.2e-96 356.3 273 63.7
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 2.2e-96 356.3 271 62.7
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 5.0e-96 355.1 279 62.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 6.5e-96 354.8 277 63.5
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 6.5e-96 354.8 277 63.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 2.5e-95 352.8 277 62.5
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.5e-95 352.8 277 63.2
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 3.2e-95 352.4 277 62.1
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.6e-94 350.1 271 63.1
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.6e-94 350.1 277 62.8
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.6e-94 350.1 277 62.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.6e-94 350.1 277 62.8
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.1e-94 349.7 271 64.6
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 7.9e-94 347.8 277 62.8
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.8e-93 346.7 277 62.1
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 2.3e-93 346.3 277 61.4
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.3e-93 346.3 277 61.4
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 3.0e-93 345.9 277 62.1
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 3.9e-93 345.5 277 61.7
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 5.1e-93 345.1 277 61.4
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 8.8e-93 344.4 277 61.7
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 8.8e-93 344.4 279 60.6
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 2.6e-92 342.8 277 60.6
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 3.3e-92 342.4 277 60.6
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 3.3e-92 342.4 277 60.6
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 3.3e-92 342.4 277 60.6
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 3.3e-92 342.4 271 60.9
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 5.7e-92 341.7 277 60.6
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 9.7e-92 340.9 279 60.2
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 1.7e-91 340.1 277 61.4
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 2.2e-91 339.7 271 61.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.2e-91 339.7 272 62.1
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 2.8e-91 339.3 272 61.4
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 3.7e-91 339.0 277 60.3
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 4.8e-91 338.6 296 59.5
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.1e-90 337.4 277 59.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 2.0e-89 333.2 283 60.1
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 2.0e-89 333.2 327 54.7
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 3.4e-89 332.4 270 60.4
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 5.0e-88 328.6 273 59.3
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.2e-86 323.9 277 58.5
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 6.1e-86 321.6 271 59.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 6.1e-86 321.6 264 59.8
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 7.9e-86 321.2 279 58.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 8.8e-85 317.8 277 57.0
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 2.6e-84 316.2 274 57.7
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 4.4e-84 315.5 271 58.7
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 9.7e-84 314.3 272 57.7
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.8e-83 312.8 277 57.4
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 4.8e-83 312.0 277 57.0
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 6.3e-83 311.6 273 57.1
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.1e-82 310.8 246 62.2
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 7.0e-82 308.1 246 61.8
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 4.7e-78 295.4 221 63.3
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.8e-77 293.5 450 40.7
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.2e-76 290.8 277 54.5
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.0e-69 267.7 265 51.3
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.0e-69 267.7 281 48.0
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 7.0e-66 255.0 279 49.1
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-65 252.7 222 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 5.0e-64 248.8 271 46.9
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 3.6e-62 242.7 283 44.9
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.3e-59 234.2 170 65.9
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 7.3e-55 218.4 171 60.2
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 3.4e-44 183.0 144 59.7
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.9e-42 177.2 130 64.6
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.7e-41 173.3 169 52.1
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.9e-40 169.5 127 68.5
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 2.5e-39 166.8 131 58.8
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.1e-37 159.8 124 66.9
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 8.9e-29 131.7 112 58.0
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 1.5e-28 131.0 138 50.7
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.9e-26 124.0 86 74.4
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 1.3e-24 117.9 142 48.6
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 4.3e-23 112.8 122 53.3
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 5.6e-23 112.5 145 45.5
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 4.4e-20 102.8 103 52.4
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 5.8e-20 102.4 154 42.9
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 3.5e-17 93.2 174 35.6
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 2.7e-09 67.0 93 47.3
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 2.7e-09 67.0 110 35.5
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.7e-06 56.6 148 31.8
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 4.8e-06 56.2 236 27.1


User provided reference genes

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