Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 2.1e-88 328.9 163 100.0
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 3.7e-24 115.5 120 56.7
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 6.1e-19 98.2 138 47.8
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.0e-18 97.4 117 51.3
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.4e-18 97.1 143 49.7
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 2.3e-18 96.3 117 53.0
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 5.2e-18 95.1 127 50.4
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 5.2e-18 95.1 85 65.9
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 8.9e-18 94.4 134 46.3
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.2e-17 94.0 75 65.3
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.5e-17 93.6 144 44.4
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.5e-17 93.6 144 44.4
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.4e-17 92.4 131 50.4
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 4.4e-17 92.0 141 45.4
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 4.4e-17 92.0 127 48.8
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 4.4e-17 92.0 142 48.6
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 7.5e-17 91.3 59 79.7
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.3e-16 90.5 132 48.5
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.7e-16 90.1 59 76.3
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.2e-16 89.7 61 77.0
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 2.2e-16 89.7 118 50.8
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.7e-16 89.0 66 71.2
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 2.4e-15 86.3 141 45.4
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 2.4e-15 86.3 61 73.8
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 3.2e-15 85.9 61 70.5
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 3.2e-15 85.9 144 39.6
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 4.1e-15 85.5 142 45.8
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 5.4e-15 85.1 108 51.9
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 1.6e-14 83.6 139 46.0
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 4.6e-14 82.0 61 70.5
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 6.0e-14 81.6 62 66.1
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.0e-13 80.9 127 41.7
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 3.0e-13 79.3 64 62.5
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 3.0e-13 79.3 120 45.8
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 6.6e-13 78.2 61 65.6
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 6.6e-13 78.2 59 66.1
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 6.6e-13 78.2 102 47.1
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 1.1e-12 77.4 61 67.2
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.5e-12 77.0 110 46.4
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.5e-12 77.0 75 58.7
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.5e-12 77.0 148 39.9
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.5e-12 76.3 148 37.8
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 3.3e-12 75.9 64 64.1
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 3.3e-12 75.9 64 60.9
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 3.3e-12 75.9 64 60.9
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 3.3e-12 75.9 81 49.4
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 4.3e-12 75.5 79 51.9
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 4.3e-12 75.5 133 41.4
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 5.6e-12 75.1 136 41.2
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 7.3e-12 74.7 59 64.4
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 7.3e-12 74.7 137 39.4
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 9.5e-12 74.3 161 38.5
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.2e-11 73.9 135 41.5
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.2e-11 73.9 135 40.0
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.2e-11 73.9 83 53.0
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.6e-11 73.6 133 41.4
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.1e-11 73.2 155 39.4
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.1e-11 73.2 47 74.5
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 2.1e-11 73.2 79 49.4
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 2.8e-11 72.8 64 59.4
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 3.6e-11 72.4 93 48.4
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.6e-11 72.4 109 43.1
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 3.6e-11 72.4 54 66.7
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.6e-11 72.4 109 43.1
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 3.6e-11 72.4 93 48.4
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 3.6e-11 72.4 54 66.7
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 3.6e-11 72.4 107 44.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 3.6e-11 72.4 138 40.6
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 6.2e-11 71.6 44 72.7
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 6.2e-11 71.6 125 36.8
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 6.2e-11 71.6 61 65.6
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 8.0e-11 71.2 149 36.2
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 8.0e-11 71.2 136 39.7
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.1e-10 70.9 129 40.3
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 1.1e-10 70.9 139 39.6
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-10 70.5 138 40.6
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.4e-10 70.5 106 41.5
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.8e-10 70.1 78 48.7
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 2.3e-10 69.7 126 38.1
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 2.3e-10 69.7 126 38.1
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.3e-10 69.7 40 80.0
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 4.0e-10 68.9 109 41.3
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 4.0e-10 68.9 93 47.3
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 4.0e-10 68.9 91 50.5
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 8.9e-10 67.8 44 70.5
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.0e-09 66.6 94 46.8
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.4e-09 65.5 132 40.9
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.8e-09 65.1 132 40.2
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 5.8e-09 65.1 74 51.4
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 7.5e-09 64.7 91 46.2
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.7e-08 63.5 61 60.7
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 1.7e-08 63.5 132 40.2
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.7e-08 63.5 132 40.2
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 2.2e-08 63.2 122 40.2
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.2e-08 63.2 132 39.4
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 6.4e-08 61.6 34 82.4
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 8.3e-08 61.2 87 46.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.1e-07 60.8 61 55.7
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.9e-07 60.1 32 81.2
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.4e-07 59.7 61 54.1
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 3.2e-07 59.3 116 39.7
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 3.2e-07 59.3 86 44.2
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 5.4e-07 58.5 58 56.9
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 5.4e-07 58.5 125 34.4
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 4.6e-06 55.5 133 36.1


User provided reference genes

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