Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G194 Amborella trichopoda HOM05D007538 ORTHO05D009464 7.1e-43 176.8 85 100.0
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.3e-07 59.7 50 56.0
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 4.8e-07 57.8 48 58.3
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.1e-06 56.6 49 53.1
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.4e-06 56.2 50 64.0
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.4e-06 56.2 50 64.0
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 1.4e-06 56.2 48 62.5
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.8e-06 55.8 67 46.3
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.8e-06 55.8 67 43.3
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.8e-06 55.8 67 43.3
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 1.8e-06 55.8 40 57.5
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 2.4e-06 55.5 47 57.4
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 3.1e-06 55.1 73 45.2
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 4.1e-06 54.7 50 62.0
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 5.3e-06 54.3 31 71.0


User provided reference genes

Program Settings