Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 8.5e-102 373.6 182 100.0
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 2.7e-55 219.2 171 60.8
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 1.7e-54 216.5 167 61.7
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 3.6e-52 208.8 169 59.2
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.8e-51 206.5 170 58.8
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.3e-51 206.1 187 54.0
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.3e-51 206.1 169 58.6
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 3.1e-51 205.7 168 56.5
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 3.1e-51 205.7 173 57.2
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 3.1e-51 205.7 176 55.7
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 4.0e-51 205.3 172 57.6
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 6.8e-51 204.5 174 56.9
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 8.9e-51 204.1 173 58.4
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 8.9e-51 204.1 168 58.3
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 3.4e-50 202.2 170 55.3
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 3.4e-50 202.2 145 67.6
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 4.4e-50 201.8 173 57.8
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 5.8e-50 201.4 177 57.1
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 5.8e-50 201.4 161 58.4
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 9.8e-50 200.7 177 55.9
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 9.8e-50 200.7 169 56.8
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 9.8e-50 200.7 171 55.0
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 2.9e-49 199.1 172 56.4
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 6.4e-49 198.0 173 54.3
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 6.4e-49 198.0 174 55.7
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 6.4e-49 198.0 171 55.6
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 6.4e-49 198.0 178 53.9
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 8.3e-49 197.6 181 50.8
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 8.3e-49 197.6 173 56.1
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 1.4e-48 196.8 171 55.0
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.4e-48 196.8 162 58.6
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.4e-48 196.8 174 56.9
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.9e-48 196.4 185 51.4
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 4.1e-48 195.3 182 51.6
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 4.1e-48 195.3 174 57.5
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 4.1e-48 195.3 174 57.5
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 4.1e-48 195.3 171 54.4
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 5.4e-48 194.9 168 54.8
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 7.0e-48 194.5 174 56.3
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 1.2e-47 193.7 174 56.3
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.6e-47 193.4 173 55.5
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.6e-47 193.4 173 55.5
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.0e-47 193.0 177 55.4
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 2.0e-47 193.0 174 57.5
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.5e-47 192.2 181 52.5
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 3.5e-47 192.2 181 52.5
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 3.5e-47 192.2 162 55.6
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 6.0e-47 191.4 172 52.9
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 6.0e-47 191.4 172 54.7
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 7.8e-47 191.0 173 53.8
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 7.8e-47 191.0 174 52.9
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.0e-46 190.7 170 54.1
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 1.3e-46 190.3 176 52.8
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.3e-46 190.3 183 54.6
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 1.3e-46 190.3 168 52.4
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 5.0e-46 188.3 173 51.4
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 5.0e-46 188.3 173 53.8
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 6.6e-46 188.0 176 51.1
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 8.6e-46 187.6 177 53.7
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 8.6e-46 187.6 172 52.3
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 1.1e-45 187.2 190 48.9
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 1.9e-45 186.4 179 52.5
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 2.5e-45 186.0 164 54.9
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 3.6e-44 182.2 140 62.1
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 4.7e-44 181.8 170 55.9
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 4.7e-44 181.8 128 64.8
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 8.1e-44 181.0 128 66.4
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 8.1e-44 181.0 181 49.2
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 8.1e-44 181.0 169 52.1
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 8.1e-44 181.0 171 49.7
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 8.1e-44 181.0 170 50.6
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.1e-43 180.6 181 49.7
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 3.1e-43 179.1 172 54.7
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 3.1e-43 179.1 168 50.0
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 6.8e-43 177.9 169 52.7
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 6.8e-43 177.9 168 50.0
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 6.8e-43 177.9 212 44.8
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 8.9e-43 177.6 151 55.6
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 8.9e-43 177.6 174 50.6
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.2e-42 177.2 125 65.6
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.2e-42 177.2 181 48.6
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 2.6e-42 176.0 176 49.4
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 2.6e-42 176.0 176 49.4
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 2.6e-42 176.0 177 49.7
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 7.5e-42 174.5 167 50.3
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 7.5e-42 174.5 150 53.3
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 1.7e-41 173.3 178 50.6
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 2.9e-41 172.6 178 48.9
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 2.9e-41 172.6 165 49.7
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 4.9e-41 171.8 180 46.7
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 4.9e-41 171.8 178 47.2
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 6.4e-41 171.4 178 47.8
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 6.4e-41 171.4 165 48.5
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 6.4e-41 171.4 128 62.5
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 8.3e-41 171.0 177 47.5
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 8.3e-41 171.0 223 42.2
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.4e-40 170.2 177 48.0
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.2e-40 169.1 177 49.2
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 4.1e-40 168.7 175 45.7
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 5.4e-40 168.3 181 47.5
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 9.2e-40 167.5 179 47.5
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 2.7e-39 166.0 189 46.0
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 2.7e-39 166.0 189 46.0
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 3.5e-39 165.6 179 46.9
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.3e-38 163.7 190 45.8
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.3e-38 163.7 190 45.8
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 3.9e-38 162.2 191 44.5
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 8.6e-38 161.0 168 48.8
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 3.3e-37 159.1 190 42.1
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 4.9e-33 145.2 222 38.3
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 2.4e-32 142.9 202 41.1
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 3.2e-32 142.5 148 49.3
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.2e-28 130.6 138 49.3
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 2.8e-28 129.4 141 47.5
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 3.6e-28 129.0 175 41.1
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 9.9e-26 120.9 177 41.2
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 4.2e-24 115.5 83 60.2
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 7.1e-24 114.8 148 41.9
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 1.6e-23 113.6 85 58.8
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 2.3e-22 109.8 82 61.0
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 1.1e-19 100.9 75 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 3.8e-17 92.4 127 39.4
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 2.3e-14 83.2 163 32.5
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 2.9e-09 66.2 44 65.9
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 2.9e-09 66.2 143 32.9
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 3.0e-06 56.2 41 51.2


User provided reference genes

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