Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G132 Amborella trichopoda HOM05D007271 ORTHO05D009217 2.0e-46 188.7 94 100.0
Thecc.03G314300 Theobroma cacao HOM05D007271 ORTHO05D009217 3.9e-10 68.2 84 41.7
Duzib068G0217 Durio zibethinus HOM05D007271 ORTHO05D009217 5.1e-10 67.8 84 39.3
TAR375G0504 Trochodendron aralioides HOM05D007271 ORTHO05D009217 2.0e-09 65.9 79 44.3
Cc08_g04070 Coffea canephora HOM05D007271 ORTHO05D009217 3.3e-09 65.1 86 39.5
DCAR_004256 Daucus carota HOM05D007271 ORTHO05D009217 7.4e-09 63.9 97 33.0
Gohir.A12G204300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 9.7e-09 63.5 80 40.0
Gohir.D12G206700 Gossypium hirsutum HOM05D007271 ORTHO05D009217 9.7e-09 63.5 85 38.8
COL.COLO4_16886 Corchorus olitorius HOM05D007271 ORTHO05D009217 1.3e-08 63.2 96 36.5
Dinv29036 Davidia involucrata HOM05D007271 ORTHO05D009217 1.7e-08 62.8 98 39.8
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 1.7e-08 62.8 56 50.0
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.7e-08 62.8 56 50.0
Gorai.008G222100 Gossypium raimondii HOM05D007271 ORTHO05D009217 1.7e-08 62.8 85 38.8
Oeu061071.1 Olea europaea HOM05D007271 ORTHO05D009217 1.7e-08 62.8 79 41.8
RcHm_v2.0_Chr7g0212901 Rosa chinensis HOM05D007271 ORTHO05D009217 2.2e-08 62.4 56 50.0
Prupe.5G024200 Prunus persica HOM05D007271 ORTHO05D009217 4.8e-08 61.2 81 44.4
GSVIVG01026362001 Vitis vinifera HOM05D007271 ORTHO05D009217 6.3e-08 60.8 91 39.6
Nitab4.5_0000109g0130 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.1e-07 60.1 100 37.0
Actinidia14763 Actinidia chinensis HOM05D007271 ORTHO05D009217 1.4e-07 59.7 97 38.1
Aqoxy7G00878 Aquilegia oxysepala HOM05D007271 ORTHO05D009217 1.4e-07 59.7 87 35.6
Ciclev10003885m.g Citrus clementina HOM05D007271 ORTHO05D009217 1.4e-07 59.7 86 34.9
Eucgr.D02621 Eucalyptus grandis HOM05D007271 ORTHO05D009217 1.4e-07 59.7 84 39.3
FAN04G0635 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-07 59.7 56 48.2
FAN08G2102 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-07 59.7 56 48.2
FAN13G0287 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-07 59.7 56 48.2
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-07 59.7 56 48.2
MD00G1000300 Malus domestica HOM05D007271 ORTHO05D009217 1.4e-07 59.7 52 55.8
Gorai.004G180600 Gossypium raimondii HOM05D007271 ORTHO05D009217 1.8e-07 59.3 88 36.4
DCAR_008194 Daucus carota HOM05D007271 ORTHO05D009217 2.4e-07 58.9 99 34.3
Hma1.2p1_0635F.1_g193160 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 2.4e-07 58.9 79 43.0
Gohir.A08G152200 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.1e-07 58.5 88 36.4
Haze_08102 Corylus avellana HOM05D007271 ORTHO05D009217 4.1e-07 58.2 68 44.1
MBI04_g36029_MAGBIO Magnolia biondii HOM05D007271 ORTHO05D009217 4.1e-07 58.2 84 36.9
Nitab4.5_0005761g0060 Nicotiana tabacum HOM05D007271 ORTHO05D009217 4.1e-07 58.2 101 34.7
Oeu001193.1 Olea europaea HOM05D007271 ORTHO05D009217 4.1e-07 58.2 84 41.7
Cfa012560 Carpinus fangiana HOM05D007271 ORTHO05D009217 5.3e-07 57.8 71 45.1
Migut.A00579 Erythranthe guttata HOM05D007271 ORTHO05D009217 6.9e-07 57.4 75 40.0
Gohir.D08G173300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 6.9e-07 57.4 84 35.7
Lj2g0009393 Lotus japonicus HOM05D007271 ORTHO05D009217 1.5e-06 56.2 95 36.8
PGR042G3154 Punica granatum HOM05D007271 ORTHO05D009217 1.5e-06 56.2 81 38.3
unitig_748.g8136 Utricularia gibba HOM05D007271 ORTHO05D009217 1.5e-06 56.2 84 38.1
Sed0019673 Sechium edule HOM05D007271 ORTHO05D009217 2.6e-06 55.5 77 40.3
CANSAT21G2130 Cannabis sativa HOM05D007271 ORTHO05D009217 5.9e-06 54.3 71 46.5
TPR.G9088 Trifolium pratense HOM05D007271 ORTHO05D009217 5.9e-06 54.3 88 36.4
Cpa.g.sc104.82 Carica papaya HOM05D007271 ORTHO05D009217 7.7e-06 53.9 89 38.2
Peaxi162Scf00185g01619 Petunia axillaris HOM05D007271 ORTHO05D009217 7.7e-06 53.9 74 43.2


User provided reference genes

Program Settings