Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 2.9e-91 340.1 508 100.0
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 2.0e-55 221.1 501 87.6
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 6.5e-51 206.1 501 85.6
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 9.4e-50 202.2 501 81.0
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 8.8e-48 195.7 500 81.4
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 3.4e-47 193.7 496 81.0
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 1.7e-46 191.4 501 82.0
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 1.1e-45 188.7 502 83.7
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 7.0e-45 186.0 502 81.9
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 7.0e-45 186.0 297 82.8
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 9.1e-45 185.7 501 79.8
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 1.2e-44 185.3 505 82.6
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 1.2e-44 185.3 501 80.6
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 2.0e-44 184.5 502 83.7
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 7.7e-44 182.6 501 80.4
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 7.7e-44 182.6 501 80.8
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 7.7e-44 182.6 502 78.7
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.0e-43 182.2 502 77.9
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.3e-43 181.8 502 78.1
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.7e-43 181.4 501 80.8
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 2.2e-43 181.0 501 72.9
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 6.5e-43 179.5 502 83.3
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.5e-42 178.3 504 78.8
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.9e-42 177.9 503 82.7
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.9e-42 177.9 501 79.8
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 2.5e-42 177.6 502 79.9
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 5.5e-42 176.4 501 80.4
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 7.2e-42 176.0 508 82.7
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 7.2e-42 176.0 508 82.7
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 7.2e-42 176.0 502 80.5
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 2.7e-41 174.1 503 79.7
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 3.6e-41 173.7 503 79.5
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.6e-41 173.7 502 78.7
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 3.6e-41 173.7 525 76.4
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 5.2e-40 169.9 501 80.4
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.2e-40 169.9 123 65.9
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.2e-40 169.9 123 65.9
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 6.8e-40 169.5 123 68.3
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 8.8e-40 169.1 509 58.0
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 2.0e-39 167.9 501 79.8
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 2.6e-39 167.5 501 78.0
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 3.4e-39 167.2 501 81.6
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 2.2e-38 164.5 123 63.4
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 2.8e-38 164.1 503 79.5
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 6.3e-38 162.9 295 79.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 6.3e-38 162.9 123 68.3
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 8.3e-38 162.5 501 79.0
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 4.1e-37 160.2 124 64.5
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.1e-37 160.2 124 64.5
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 5.4e-37 159.8 501 78.8
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 9.1e-37 159.1 123 65.9
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 9.1e-37 159.1 501 78.2
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 2.0e-36 157.9 123 65.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 2.0e-36 157.9 125 63.2
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 2.0e-36 157.9 125 63.2
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 2.7e-36 157.5 501 80.8
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 2.7e-36 157.5 123 64.2
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 3.5e-36 157.1 123 65.0
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.9e-36 156.4 134 60.4
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 7.7e-36 156.0 124 62.1
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 7.7e-36 156.0 123 61.8
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 1.0e-35 155.6 123 60.2
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 1.3e-35 155.2 123 65.0
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 1.3e-35 155.2 123 65.0
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 1.3e-35 155.2 123 65.0
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.3e-35 155.2 123 65.0
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 1.3e-35 155.2 123 65.0
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.7e-35 154.8 501 77.6
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 1.7e-35 154.8 123 64.2
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 2.3e-35 154.5 123 64.2
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 2.9e-35 154.1 125 63.2
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 2.9e-35 154.1 123 62.6
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 3.8e-35 153.7 123 61.8
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 3.8e-35 153.7 123 61.8
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 3.8e-35 153.7 122 60.7
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 3.8e-35 153.7 472 82.4
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 5.0e-35 153.3 540 63.3
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 8.6e-35 152.5 124 62.1
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 8.6e-35 152.5 121 66.1
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 1.5e-34 151.8 501 77.2
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 1.5e-34 151.8 125 64.0
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.9e-34 151.4 124 62.9
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 2.5e-34 151.0 501 78.8
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 4.2e-34 150.2 120 63.3
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 5.6e-34 149.8 123 61.8
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 5.6e-34 149.8 123 61.8
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 7.2e-34 149.4 121 62.8
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 1.6e-33 148.3 123 57.7
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 3.6e-33 147.1 127 62.2
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 3.6e-33 147.1 128 53.9
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 4.7e-33 146.7 123 60.2
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.0e-32 145.6 502 66.1
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 2.3e-32 144.4 118 59.3
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 3.0e-32 144.1 110 63.6
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 4.0e-32 143.7 117 59.0
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 2.0e-31 141.4 466 82.2
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 4.4e-31 140.2 515 75.7
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 5.7e-31 139.8 122 55.7
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 2.2e-30 137.9 115 59.1
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 9.2e-29 132.5 124 54.8
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 1.7e-27 128.3 115 58.3
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.9e-27 127.5 106 59.4
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 8.6e-27 125.9 505 76.6
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 3.3e-26 124.0 105 58.1
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 5.6e-26 123.2 105 58.1
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 7.3e-26 122.9 138 50.0
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 4.0e-24 117.1 127 51.2
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 2.0e-23 114.8 99 60.6
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 1.9e-21 108.2 101 59.4
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 5.4e-21 106.7 226 89.8
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.2e-20 105.5 470 79.1
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 3.9e-19 100.5 459 82.8
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 1.5e-18 98.6 257 79.4
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.5e-18 98.6 459 79.7
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.5e-18 98.6 459 79.7
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 8.9e-16 89.4 73 54.8
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 8.9e-16 89.4 73 54.8
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 4.4e-15 87.0 461 80.3
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 9.8e-15 85.9 240 81.2
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 1.3e-14 85.5 61 65.6
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 1.1e-13 82.4 246 80.9
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.3e-11 74.7 242 79.8
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 3.0e-11 74.3 127 37.8
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.5e-10 72.0 102 41.2
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 1.9e-10 71.6 103 44.7


User provided reference genes

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