Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 0.0e+00 1183.3 604 100.0
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 4.1e-161 572.4 599 50.8
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 1.2e-160 570.9 575 53.7
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 6.6e-159 565.1 575 53.2
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 1.2e-157 560.8 650 49.2
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 7.0e-153 545.0 610 50.3
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 3.9e-151 539.3 603 50.1
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 6.6e-151 538.5 529 53.1
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 5.6e-150 535.4 638 48.1
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 5.6e-150 535.4 596 50.8
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 1.2e-149 534.3 638 47.6
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 8.1e-149 531.6 593 49.1
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 8.1e-149 531.6 643 46.2
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 5.2e-148 528.9 619 49.8
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 5.2e-148 528.9 614 50.0
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.2e-147 527.7 611 50.2
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.5e-147 527.3 613 48.3
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 2.0e-147 526.9 608 48.5
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 5.8e-147 525.4 661 47.2
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 1.7e-146 523.9 650 46.5
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 1.7e-146 523.9 637 46.3
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 2.2e-146 523.5 643 46.5
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 2.2e-146 523.5 597 47.7
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 2.9e-146 523.1 616 50.2
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 3.7e-146 522.7 600 49.7
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 6.4e-146 521.9 611 49.3
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.1e-145 521.2 566 50.4
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.4e-145 520.8 586 50.2
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 1.9e-145 520.4 568 52.3
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 2.4e-145 520.0 635 47.4
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 3.2e-145 519.6 581 50.1
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 5.4e-145 518.8 597 50.3
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 5.4e-145 518.8 628 47.8
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 9.2e-145 518.1 606 47.4
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 1.2e-144 517.7 649 46.8
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.2e-144 517.7 624 47.6
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 1.6e-144 517.3 650 46.8
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 2.1e-144 516.9 634 47.8
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 4.6e-144 515.8 581 49.6
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 7.8e-144 515.0 640 47.5
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 7.8e-144 515.0 644 46.3
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 1.3e-143 514.2 603 48.9
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.7e-143 513.8 651 47.3
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 1.7e-143 513.8 645 47.3
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 1.7e-143 513.8 598 47.5
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 2.3e-143 513.5 598 49.7
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 3.0e-143 513.1 593 49.1
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 3.0e-143 513.1 627 46.7
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 5.1e-143 512.3 638 47.0
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 6.6e-143 511.9 648 46.3
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 6.6e-143 511.9 648 46.3
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 8.6e-143 511.5 641 45.6
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 3.3e-142 509.6 646 46.1
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 4.7e-141 505.8 640 45.0
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 1.1e-140 504.6 638 46.9
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 1.4e-140 504.2 637 45.5
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.8e-140 503.8 567 49.0
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.8e-140 503.8 630 45.9
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.4e-140 503.4 563 50.8
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 2.4e-140 503.4 615 47.3
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 4.0e-140 502.7 563 50.8
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 4.0e-140 502.7 646 45.8
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 4.0e-140 502.7 627 46.9
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 6.8e-140 501.9 569 48.0
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.2e-139 501.1 617 46.0
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 2.0e-139 500.4 650 44.5
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.6e-139 500.0 560 51.2
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 3.4e-139 499.6 644 44.7
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 4.4e-139 499.2 651 45.2
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 1.1e-137 494.6 567 48.3
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.1e-137 494.6 627 46.9
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 1.9e-137 493.8 652 44.2
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 2.4e-137 493.4 642 46.3
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.5e-136 489.6 521 52.0
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 3.0e-135 486.5 620 46.3
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.5e-134 484.2 629 46.4
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 2.5e-134 483.4 629 46.9
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 2.5e-134 483.4 588 46.8
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 4.3e-134 482.6 500 52.4
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 7.3e-134 481.9 636 44.7
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 2.1e-133 480.3 629 45.3
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 6.2e-133 478.8 575 47.5
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 1.1e-132 478.0 636 44.3
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 2.4e-132 476.9 592 45.4
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 4.4e-131 472.6 636 45.3
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 8.4e-130 468.4 543 46.6
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.9e-129 467.2 616 45.1
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 1.6e-128 464.2 524 47.5
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 1.0e-127 461.5 544 46.0
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 2.3e-127 460.3 611 43.9
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 2.3e-127 460.3 618 45.0
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 2.3e-127 460.3 618 45.0
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 3.9e-127 459.5 605 46.0
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 1.1e-126 458.0 587 44.0
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 1.9e-126 457.2 593 43.5
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 2.5e-126 456.8 645 42.6
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 5.6e-126 455.7 598 43.3
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 7.3e-126 455.3 616 42.9
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.6e-125 454.1 589 46.0
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 2.1e-125 453.8 605 43.1
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 3.6e-125 453.0 602 45.3
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 6.2e-125 452.2 602 45.3
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 6.2e-125 452.2 568 44.2
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.4e-124 451.1 539 46.0
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 2.4e-124 450.3 577 45.9
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 5.3e-124 449.1 617 42.1
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 9.0e-124 448.4 617 42.0
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 3.4e-123 446.4 621 44.8
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 1.7e-122 444.1 643 41.2
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 2.9e-122 443.4 613 41.8
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 2.9e-122 443.4 545 45.7
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 9.3e-121 438.3 587 43.3
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 2.1e-120 437.2 606 42.2
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 1.8e-119 434.1 614 44.1
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 2.8e-117 426.8 557 43.6
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 2.5e-113 413.7 590 40.7
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 3.2e-113 413.3 507 46.2
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 1.0e-111 408.3 600 39.7
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.4e-108 397.9 441 50.3
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 2.1e-104 384.0 603 39.5
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 3.9e-103 379.8 619 38.4
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 6.9e-100 369.0 528 39.0
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 5.5e-97 359.4 539 39.3
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.6e-96 357.8 527 37.8
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 1.7e-93 347.8 467 40.7
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 2.9e-90 337.0 414 43.7
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 2.6e-75 287.3 360 43.9
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 2.7e-72 277.3 598 35.3
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 2.0e-70 271.2 243 53.9
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 3.8e-66 256.9 315 44.1
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 2.2e-61 241.1 304 45.1
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 4.5e-59 233.4 221 54.3
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 1.7e-42 178.3 125 64.8
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 7.6e-30 136.3 237 38.8
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 1.6e-16 92.0 575 23.1
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 1.8e-07 62.0 106 34.9


User provided reference genes

Program Settings