Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 1.1e-102 376.7 203 100.0
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 1.4e-33 147.1 201 45.8
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 5.7e-30 135.2 199 42.2
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.4e-28 130.6 122 53.3
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 5.3e-28 128.6 122 53.3
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 6.9e-28 128.3 197 41.1
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 2.0e-27 126.7 127 52.8
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 2.0e-27 126.7 210 37.1
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 4.5e-27 125.6 147 51.0
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 1.0e-26 124.4 197 42.6
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.3e-26 124.0 184 45.1
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 1.7e-26 123.6 128 48.4
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 1.7e-26 123.6 212 38.2
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 3.8e-26 122.5 171 41.5
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 3.8e-26 122.5 201 36.3
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 8.4e-26 121.3 123 51.2
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 1.1e-25 120.9 120 53.3
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 1.4e-25 120.6 171 40.9
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.9e-25 120.2 194 35.6
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 2.5e-25 119.8 204 38.2
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 3.2e-25 119.4 198 38.9
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 4.2e-25 119.0 204 36.8
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 4.2e-25 119.0 119 52.1
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 5.5e-25 118.6 195 40.5
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 7.2e-25 118.2 180 41.7
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 9.3e-25 117.9 171 40.4
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 9.3e-25 117.9 128 48.4
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.6e-24 117.1 196 38.3
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 2.7e-24 116.3 138 44.9
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 4.6e-24 115.5 196 40.3
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 6.1e-24 115.2 173 38.2
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 6.1e-24 115.2 137 44.5
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 7.9e-24 114.8 133 50.4
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.0e-23 114.4 124 46.8
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.0e-23 114.4 124 46.8
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 1.0e-23 114.4 192 37.5
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 1.0e-23 114.4 189 41.3
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.3e-23 114.0 170 38.8
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 2.3e-23 113.2 141 44.7
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.3e-23 113.2 141 44.7
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.3e-23 113.2 141 44.7
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 3.0e-23 112.8 198 37.9
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 3.0e-23 112.8 198 37.9
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 3.0e-23 112.8 195 43.1
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 3.9e-23 112.5 181 37.6
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 3.9e-23 112.5 122 48.4
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 8.7e-23 111.3 149 43.0
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 1.1e-22 110.9 177 37.3
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 3.3e-22 109.4 140 42.1
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 3.3e-22 109.4 141 42.6
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 3.3e-22 109.4 141 43.3
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 7.4e-22 108.2 174 39.1
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 1.6e-21 107.1 154 40.3
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 2.8e-21 106.3 144 43.8
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 2.8e-21 106.3 235 34.5
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 3.7e-21 105.9 207 35.7
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 6.3e-21 105.1 207 37.7
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 1.8e-20 103.6 194 38.1
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 4.1e-20 102.4 120 47.5
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 6.9e-20 101.7 134 42.5
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 6.9e-20 101.7 119 44.5
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 1.2e-19 100.9 119 46.2
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 2.6e-19 99.8 203 36.5
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 3.4e-19 99.4 148 43.9
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 7.7e-19 98.2 93 57.0
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 3.8e-18 95.9 177 38.4
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 3.8e-18 95.9 196 33.7
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 3.8e-18 95.9 197 37.6
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 6.5e-18 95.1 199 35.7
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.4e-17 94.0 167 38.9
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 7.2e-17 91.7 194 34.0
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 1.0e-15 87.8 104 42.3
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 1.4e-15 87.4 78 55.1
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.9e-15 85.9 180 36.7
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 5.1e-15 85.5 176 36.9
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 5.1e-15 85.5 166 33.7
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 5.1e-15 85.5 225 32.9
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 8.8e-15 84.7 76 51.3
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 8.8e-15 84.7 168 39.3
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 1.1e-14 84.3 124 40.3
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 1.5e-14 84.0 103 45.6
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 1.5e-14 84.0 79 53.2
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 1.5e-14 84.0 202 34.2
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 2.5e-14 83.2 131 42.0
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 2.2e-13 80.1 210 29.5
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 2.8e-13 79.7 111 45.0
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.7e-13 79.3 103 46.6
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 4.8e-13 79.0 137 32.8
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 1.1e-12 77.8 110 40.9
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 1.2e-11 74.3 79 41.8
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.5e-11 73.9 77 44.2
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 5.9e-11 72.0 128 36.7
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 8.5e-10 68.2 117 35.9
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.7e-08 63.2 59 52.5
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.0e-07 61.2 59 50.8
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 5.1e-07 58.9 57 50.9
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 6.7e-07 58.5 83 44.6
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 4.4e-06 55.8 174 33.9
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 9.7e-06 54.7 83 41.0
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 9.7e-06 54.7 83 41.0


User provided reference genes

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