Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 3.0e-276 954.5 464 100.0
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 3.4e-171 605.5 414 67.6
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 2.5e-166 589.3 421 66.5
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 7.3e-166 587.8 426 65.5
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 7.3e-166 587.8 418 65.6
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.4e-163 578.9 424 63.7
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 2.9e-162 575.9 387 68.7
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.4e-161 573.5 387 68.5
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 2.4e-161 572.8 422 64.0
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 4.6e-160 568.5 419 64.0
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 2.3e-159 566.2 436 61.5
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 3.9e-159 565.5 418 62.9
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 1.1e-158 563.9 412 64.1
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.9e-158 563.1 412 65.0
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 2.5e-158 562.8 404 64.1
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 3.3e-158 562.4 412 63.8
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.8e-157 559.3 412 63.8
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 3.6e-157 558.9 450 58.2
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 6.2e-157 558.1 426 59.9
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 8.1e-157 557.8 413 63.7
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.1e-156 557.4 408 61.3
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 3.1e-156 555.8 415 63.1
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 8.9e-156 554.3 430 61.9
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 1.5e-155 553.5 405 63.2
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.0e-155 553.1 430 61.4
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.0e-155 553.1 425 59.5
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 2.6e-155 552.7 423 61.7
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 2.6e-155 552.7 422 60.9
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 3.4e-155 552.4 417 60.7
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 7.6e-155 551.2 422 60.2
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 7.6e-155 551.2 413 63.2
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 7.6e-155 551.2 407 62.4
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 2.2e-154 549.7 396 65.4
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 2.9e-154 549.3 396 63.6
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.9e-154 549.3 413 63.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 6.4e-154 548.1 418 63.4
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 6.4e-154 548.1 427 60.9
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.1e-153 547.4 417 62.8
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 3.2e-153 545.8 402 65.2
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.1e-153 545.4 418 63.2
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 4.1e-153 545.4 411 60.8
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 1.6e-152 543.5 408 61.5
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.6e-152 543.5 411 60.8
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 1.6e-152 543.5 440 59.3
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 2.1e-152 543.1 402 61.9
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 2.7e-152 542.7 419 61.8
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.6e-152 542.0 408 61.0
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 1.3e-151 540.4 414 59.4
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.3e-151 540.4 416 62.0
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 1.7e-151 540.0 414 59.2
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 3.0e-151 539.3 391 62.9
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 3.9e-151 538.9 424 58.7
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 3.9e-151 538.9 426 62.0
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 6.6e-151 538.1 422 59.7
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 3.3e-150 535.8 435 59.5
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 9.6e-150 534.3 411 61.6
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 9.6e-150 534.3 414 59.7
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 6.2e-149 531.6 391 63.4
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 8.1e-149 531.2 433 58.4
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 1.1e-148 530.8 405 59.8
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 6.8e-148 528.1 395 61.8
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.5e-147 526.9 419 58.9
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 3.4e-147 525.8 433 58.2
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 3.4e-147 525.8 433 57.7
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 7.6e-147 524.6 412 59.7
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 1.1e-145 520.8 410 61.0
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 5.4e-145 518.5 397 60.7
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 7.8e-144 514.6 428 58.2
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 7.8e-144 514.6 410 60.0
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 1.7e-143 513.5 414 59.2
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.5e-142 510.4 409 59.7
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 4.3e-142 508.8 409 58.4
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.1e-141 506.5 382 62.3
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.1e-140 504.2 391 61.9
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 2.4e-140 503.1 408 58.3
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.5e-139 500.4 419 57.0
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 3.4e-139 499.2 408 57.4
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 2.9e-138 496.1 395 58.5
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 7.9e-136 488.0 472 53.2
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 1.0e-135 487.6 404 57.2
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 1.3e-135 487.3 362 60.2
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 3.1e-132 476.1 457 50.1
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 6.9e-132 474.9 370 60.3
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 2.1e-125 453.4 383 54.8
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.2e-123 447.6 387 53.2
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 5.7e-118 428.7 291 69.4
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 8.2e-117 424.9 427 47.8
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.6e-112 410.6 292 64.7
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 7.9e-112 408.3 281 66.5
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.1e-108 396.0 284 65.1
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.6e-104 382.9 422 48.6
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 5.9e-99 365.5 414 48.3
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 2.9e-98 363.2 274 63.5
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 2.1e-96 357.1 372 49.2
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.0e-95 354.8 281 59.8
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 5.1e-95 352.4 372 47.8
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 9.7e-94 348.2 211 73.5
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.5e-89 333.6 262 64.9
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 7.2e-89 332.0 411 43.3
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.8e-84 317.4 233 64.4
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.7e-82 310.8 230 64.8
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 6.8e-79 298.9 247 62.3
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 9.8e-62 241.9 334 39.5
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.4e-60 237.3 168 61.9
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.2e-54 218.4 197 49.7
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 1.2e-54 218.4 396 33.8
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.0e-51 207.6 282 37.9
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 5.6e-41 172.9 397 32.2
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 1.2e-40 171.8 513 26.1
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 6.4e-37 159.5 110 69.1
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 1.1e-36 158.7 125 55.2
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 7.1e-36 156.0 125 59.2
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 6.6e-34 149.4 160 45.0
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 1.1e-33 148.7 124 52.4
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 5.6e-33 146.4 107 67.3
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 2.8e-32 144.1 123 51.2
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 8.1e-32 142.5 154 44.8
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.1e-27 127.9 91 69.2
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 3.9e-26 123.6 328 29.9
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 9.0e-15 85.9 95 44.2
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 1.2e-14 85.5 78 57.7
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 2.6e-14 84.3 62 56.5
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.6e-11 73.6 54 55.6
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 1.3e-08 65.5 35 62.9
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 2.4e-07 61.2 37 67.6


User provided reference genes

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