Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 5.9e-55 217.2 105 100.0
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 4.5e-39 164.5 107 76.6
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.3e-38 162.9 94 80.9
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.9e-37 159.1 90 83.3
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 2.5e-37 158.7 94 79.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 2.5e-37 158.7 100 77.0
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 4.2e-37 157.9 108 71.3
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.5e-37 157.5 117 69.2
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 5.5e-37 157.5 86 86.0
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 5.5e-37 157.5 89 83.1
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 7.2e-37 157.1 95 78.9
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 7.2e-37 157.1 94 78.7
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 7.2e-37 157.1 91 82.4
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 1.2e-36 156.4 111 71.2
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.1e-36 155.6 86 84.9
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.1e-36 155.6 86 84.9
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.7e-36 155.2 103 72.8
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 3.6e-36 154.8 94 76.6
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 6.1e-36 154.1 103 71.8
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 6.1e-36 154.1 100 77.0
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 7.9e-36 153.7 75 90.7
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 7.9e-36 153.7 94 78.7
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 7.9e-36 153.7 102 72.5
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.4e-35 152.9 111 68.5
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.4e-35 152.9 101 76.2
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.3e-35 152.1 94 76.6
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 2.3e-35 152.1 101 75.2
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 3.0e-35 151.8 96 74.0
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 3.9e-35 151.4 99 74.7
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 3.9e-35 151.4 96 78.1
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.1e-35 151.0 116 64.7
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 5.1e-35 151.0 91 79.1
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 5.1e-35 151.0 100 75.0
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 5.1e-35 151.0 108 73.1
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 6.7e-35 150.6 109 69.7
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 6.7e-35 150.6 93 75.3
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 6.7e-35 150.6 101 72.3
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 6.7e-35 150.6 104 72.1
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.1e-34 149.8 103 71.8
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.1e-34 149.8 91 79.1
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.1e-34 149.8 112 67.9
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.1e-34 149.8 85 82.4
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.1e-34 149.8 101 73.3
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.5e-34 149.4 101 73.3
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.5e-34 149.4 100 76.0
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 2.0e-34 149.1 105 67.6
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 2.0e-34 149.1 103 68.9
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 2.6e-34 148.7 90 77.8
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 2.6e-34 148.7 108 70.4
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.3e-34 148.3 101 73.3
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.3e-34 148.3 101 72.3
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 4.4e-34 147.9 109 65.1
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.7e-34 147.5 125 60.8
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 5.7e-34 147.5 101 73.3
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 5.7e-34 147.5 107 67.3
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 7.4e-34 147.1 90 76.7
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 9.7e-34 146.7 93 74.2
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 9.7e-34 146.7 93 74.2
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 9.7e-34 146.7 93 74.2
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.7e-33 146.0 99 71.7
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 1.7e-33 146.0 110 66.4
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 2.2e-33 145.6 112 66.1
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.2e-33 145.6 112 65.2
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.8e-33 145.2 107 68.2
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 2.8e-33 145.2 101 71.3
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 2.8e-33 145.2 88 76.1
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 3.7e-33 144.8 93 73.1
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 3.7e-33 144.8 101 70.3
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 3.7e-33 144.8 79 82.3
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 3.7e-33 144.8 101 69.3
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 3.7e-33 144.8 102 66.7
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 4.8e-33 144.4 98 70.4
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 4.8e-33 144.4 93 73.1
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 4.8e-33 144.4 99 69.7
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 6.3e-33 144.1 107 69.2
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 8.2e-33 143.7 98 70.4
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 8.2e-33 143.7 113 64.6
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.2e-33 143.7 112 64.3
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 8.2e-33 143.7 124 62.9
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.1e-32 143.3 121 62.8
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.4e-32 142.9 76 85.5
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 1.4e-32 142.9 76 85.5
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.4e-32 142.9 127 57.5
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 2.4e-32 142.1 99 70.7
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 2.4e-32 142.1 99 70.7
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 4.1e-32 141.4 79 79.7
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 5.3e-32 141.0 78 82.1
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 5.3e-32 141.0 99 70.7
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 5.3e-32 141.0 78 82.1
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.0e-31 139.0 94 70.2
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 2.0e-31 139.0 94 70.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.6e-31 138.7 111 63.1
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.8e-30 134.8 99 68.7
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 8.5e-30 133.7 66 89.4
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 7.2e-29 130.6 62 93.5
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 9.4e-29 130.2 96 67.7
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.2e-28 129.8 83 71.1
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.2e-28 129.8 79 74.7
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 6.1e-28 127.5 103 62.1
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 8.0e-28 127.1 66 83.3
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 8.0e-28 127.1 82 74.4
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.0e-27 126.7 103 63.1
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.0e-26 122.5 65 86.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 2.6e-26 122.1 76 71.1
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 2.6e-26 122.1 91 65.9
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.6e-26 122.1 76 76.3
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 4.4e-26 121.3 104 58.7
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 1.3e-25 119.8 71 73.2
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.8e-25 118.6 62 87.1
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.4e-24 115.5 90 61.1
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.0e-22 110.2 76 72.4
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.8e-22 108.2 64 81.2
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.2e-17 92.4 95 53.7
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 2.9e-14 82.0 81 55.6
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 2.5e-13 79.0 68 60.3
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.2e-13 77.4 57 68.4
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.6e-12 76.3 61 65.6
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.0e-11 73.6 40 80.0
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.7e-09 66.2 35 80.0


User provided reference genes

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