Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 1.3e-44 183.0 109 100.0
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 5.4e-19 97.8 103 59.2
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.6e-18 96.3 90 61.1
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 7.8e-18 94.0 94 57.4
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 3.8e-17 91.7 93 60.2
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 5.0e-17 91.3 102 53.9
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 8.6e-17 90.5 91 59.3
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 1.1e-16 90.1 57 75.4
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 1.1e-16 90.1 90 65.6
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 1.9e-16 89.4 100 54.0
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 2.5e-16 89.0 91 57.1
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 3.3e-16 88.6 92 56.5
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 4.3e-16 88.2 90 56.7
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 4.3e-16 88.2 94 56.4
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 4.3e-16 88.2 94 55.3
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 5.6e-16 87.8 91 56.0
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 5.6e-16 87.8 90 54.4
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 7.3e-16 87.4 94 54.3
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 1.2e-15 86.7 93 55.9
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.2e-15 86.7 93 55.9
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.2e-15 86.7 93 55.9
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 1.6e-15 86.3 91 57.1
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 1.6e-15 86.3 90 56.7
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 2.1e-15 85.9 102 50.0
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 2.1e-15 85.9 93 58.1
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 2.1e-15 85.9 94 54.3
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.8e-15 85.5 93 54.8
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.8e-15 85.5 93 54.8
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.8e-15 85.5 93 54.8
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 2.8e-15 85.5 95 54.7
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 3.6e-15 85.1 102 51.0
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 3.6e-15 85.1 90 55.6
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 6.1e-15 84.3 94 55.3
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 6.1e-15 84.3 93 55.9
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 6.1e-15 84.3 94 55.3
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 6.1e-15 84.3 90 55.6
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 8.0e-15 84.0 94 55.3
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 1.0e-14 83.6 90 55.6
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 1.4e-14 83.2 54 75.9
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 1.4e-14 83.2 106 49.1
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 2.3e-14 82.4 90 61.1
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 3.0e-14 82.0 53 73.6
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 3.0e-14 82.0 93 53.8
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 4.0e-14 81.6 90 61.1
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 4.0e-14 81.6 90 61.1
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 4.0e-14 81.6 90 61.1
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 4.0e-14 81.6 95 51.6
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 5.2e-14 81.3 90 60.0
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 6.8e-14 80.9 93 53.8
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.8e-14 80.9 93 53.8
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 6.8e-14 80.9 94 54.3
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 1.2e-13 80.1 92 54.3
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 1.2e-13 80.1 94 52.1
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 1.2e-13 80.1 90 58.9
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 1.2e-13 80.1 91 57.1
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.5e-13 79.7 90 55.6
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 1.5e-13 79.7 90 52.2
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 2.0e-13 79.3 94 52.1
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 3.4e-13 78.6 90 51.1
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 3.4e-13 78.6 93 51.6
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 5.8e-13 77.8 53 69.8
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 7.5e-13 77.4 89 59.6
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 7.5e-13 77.4 51 74.5
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 7.5e-13 77.4 94 50.0
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 9.8e-13 77.0 90 51.1
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 9.8e-13 77.0 55 70.9
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 9.8e-13 77.0 90 52.2
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 1.3e-12 76.6 90 54.4
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 1.3e-12 76.6 90 54.4
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 1.3e-12 76.6 90 52.2
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 1.3e-12 76.6 51 72.5
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 1.7e-12 76.3 93 50.5
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 2.9e-12 75.5 53 66.0
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 2.9e-12 75.5 49 73.5
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 2.9e-12 75.5 100 49.0
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 2.9e-12 75.5 94 47.9
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 6.4e-12 74.3 89 48.3
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 6.4e-12 74.3 90 54.4
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 6.4e-12 74.3 89 52.8
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 8.3e-12 73.9 95 46.3
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 8.3e-12 73.9 91 48.4
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 1.1e-11 73.6 90 50.0
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 1.1e-11 73.6 90 50.0
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 1.4e-11 73.2 51 68.6
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 3.2e-11 72.0 89 56.2
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 4.1e-11 71.6 90 48.9
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 5.4e-11 71.2 90 50.0
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 7.0e-11 70.9 90 51.1
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 2.7e-10 68.9 96 43.8
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 3.5e-10 68.6 51 60.8
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 4.6e-10 68.2 127 40.9
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 7.8e-10 67.4 52 65.4
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 1.5e-08 63.2 91 44.0
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 2.5e-08 62.4 50 64.0
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 3.3e-08 62.0 51 60.8
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 7.3e-08 60.8 45 64.4
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 1.2e-07 60.1 51 60.8
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 1.2e-07 60.1 74 45.9
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 6.2e-07 57.8 38 68.4
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 4.0e-06 55.1 34 76.5


User provided reference genes

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