Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0827G140 Amborella trichopoda HOM05D010684 ORTHO05D012438 1.6e-112 410.2 352 100.0
ATR0827G180 Amborella trichopoda HOM05D010684 ORTHO05D012438 5.2e-31 139.4 299 45.2
ATR0827G056 Amborella trichopoda HOM05D010684 ORTHO05D012438 9.8e-30 135.2 87 73.6
ATR0680G170 Amborella trichopoda HOM05D010684 ORTHO05D012438 6.4e-21 105.9 284 53.2
ATR0680G254 Amborella trichopoda HOM05D010684 ORTHO05D012438 5.4e-20 102.8 282 60.6
ATR0680G087 Amborella trichopoda HOM05D010684 ORTHO05D012438 3.9e-18 96.7 180 67.2
ATR0453G001 Amborella trichopoda HOM05D010684 ORTHO05D012438 1.5e-17 94.7 211 57.3
ATR0641G001 Amborella trichopoda HOM05D010684 ORTHO05D012438 1.5e-17 94.7 232 55.2
ATR0462G001 Amborella trichopoda HOM05D010684 ORTHO05D012438 1.8e-15 87.8 90 46.7
ATR0680G348 Amborella trichopoda HOM05D039954 ORTHO05D011302 6.8e-15 85.9 147 59.9
ATR0720G001 Amborella trichopoda HOM05D010684 ORTHO05D012438 2.0e-14 84.3 94 48.9
ATR0680G111 Amborella trichopoda HOM05D010684 ORTHO05D012438 3.4e-14 83.6 348 58.0
ATR0951G002 Amborella trichopoda HOM05D010684 ORTHO05D012438 1.3e-13 81.6 91 49.5
Medtr4g040360 Medicago truncatula HOM05D000071 ORTHO05D000029 8.3e-13 79.0 198 55.1
ATR0680G110 Amborella trichopoda HOM05D010684 ORTHO05D012438 1.1e-12 78.6 89 47.2
ATR0680G341 Amborella trichopoda HOM05D010684 ORTHO05D012438 3.5e-11 73.6 91 45.1
TPR.G30164 Trifolium pratense HOM05D000071 ORTHO05D000029 8.6e-10 68.9 211 49.8
TPR.G30188 Trifolium pratense HOM05D000071 ORTHO05D000029 1.1e-09 68.6 212 50.9
arahy.Tifrunner.gnm1.ann1.M5E8P8 Arachis hypogaea HOM05D000071 ORTHO05D000029 1.9e-09 67.8 227 50.2
Ca_20459_v3 Cicer arietinum L. HOM05D001857 ORTHO05D006687 5.6e-09 66.2 158 62.0
Lj3g0000350 Lotus japonicus HOM05D000071 ORTHO05D000029 5.6e-09 66.2 212 35.4
arahy.Tifrunner.gnm1.ann1.IJ3JTU Arachis hypogaea HOM05D000071 ORTHO05D000029 1.2e-08 65.1 194 55.7
arahy.Tifrunner.gnm1.ann1.NYYS8D Arachis hypogaea HOM05D000071 ORTHO05D000029 1.6e-08 64.7 227 49.3
Potri.001G262800 Populus trichocarpa HOM05D000071 ORTHO05D000029 1.6e-08 64.7 214 50.9
ATR0594G049 Amborella trichopoda HOM05D000071 ORTHO05D000029 2.1e-08 64.3 194 57.7
Prupe.4G162900 Prunus persica HOM05D001506 ORTHO05D000455 2.8e-08 63.9 91 34.1
Ca_02390_v3 Cicer arietinum L. HOM05D000071 ORTHO05D000029 3.6e-08 63.5 174 57.5
arahy.Tifrunner.gnm1.ann1.XBV0BG Arachis hypogaea HOM05D000071 ORTHO05D000029 6.2e-08 62.8 195 53.3
Ciclev10033817m.g Citrus clementina HOM05D000071 ORTHO05D000029 6.2e-08 62.8 201 55.2
TPR.G30171 Trifolium pratense HOM05D000071 ORTHO05D000029 6.2e-08 62.8 194 51.5
arahy.Tifrunner.gnm1.ann1.2TEC20 Arachis hypogaea HOM05D000071 ORTHO05D000029 8.1e-08 62.4 227 49.3
Lj4g0024058 Lotus japonicus HOM05D000071 ORTHO05D000029 1.1e-07 62.0 230 48.7
Manes.10G093101 Manihot esculenta HOM05D000071 ORTHO05D000029 1.1e-07 62.0 218 50.0
QL05p009155 Quercus lobata HOM05D000071 ORTHO05D000029 1.1e-07 62.0 221 50.2
ATR0827G024 Amborella trichopoda HOM05D039954 ORTHO05D012438 1.4e-07 61.6 125 78.4
CAN.G280.13 Capsicum annuum HOM05D000071 ORTHO05D000029 1.4e-07 61.6 240 23.3
Prupe.4G163700 Prunus persica HOM05D001506 ORTHO05D000455 1.4e-07 61.6 88 34.1
Glyma.19G115000 Glycine max HOM05D000071 ORTHO05D000029 1.8e-07 61.2 196 54.6
Medtr4g040330 Medicago truncatula HOM05D000071 ORTHO05D000029 3.1e-07 60.5 211 49.3
Dinv32122 Davidia involucrata HOM05D000071 ORTHO05D000029 4.0e-07 60.1 229 43.7
Eucgr.L02633 Eucalyptus grandis HOM05D000071 ORTHO05D000029 4.0e-07 60.1 213 50.7
MD02G1271900 Malus domestica HOM05D000071 ORTHO05D000029 4.0e-07 60.1 198 51.5
Eucgr.G03338 Eucalyptus grandis HOM05D000071 ORTHO05D000029 6.8e-07 59.3 214 50.5
Nn2g15249 Nelumbo nucifera HOM05D000071 ORTHO05D000029 6.8e-07 59.3 224 49.1
arahy.Tifrunner.gnm1.ann1.R2JS4W Arachis hypogaea HOM05D000071 ORTHO05D000029 8.9e-07 58.9 195 52.8
arahy.Tifrunner.gnm1.ann1.X0BQJV Arachis hypogaea HOM05D000071 ORTHO05D000029 8.9e-07 58.9 220 50.0
Gohir.D03G053100 Gossypium hirsutum HOM05D000071 ORTHO05D000029 8.9e-07 58.9 186 57.0
Gorai.003G055300 Gossypium raimondii HOM05D000071 ORTHO05D000029 8.9e-07 58.9 186 57.0
Prupe.2G104600 Prunus persica HOM05D001506 ORTHO05D000455 1.2e-06 58.5 88 34.1
QL04p009707 Quercus lobata HOM05D000071 ORTHO05D000029 1.5e-06 58.2 216 49.5
Ciclev10007102m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.0e-06 57.8 243 46.5
MD14G1186300 Malus domestica HOM05D000071 ORTHO05D000029 2.0e-06 57.8 200 50.5
Medtr3g449240 Medicago truncatula HOM05D000071 ORTHO05D000029 2.6e-06 57.4 87 32.2
Phvul.004G115100 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 2.6e-06 57.4 216 50.9
Prupe.4G169500 Prunus persica HOM05D001506 ORTHO05D000455 2.6e-06 57.4 88 31.8
Eucgr.D00672 Eucalyptus grandis HOM05D000071 ORTHO05D000029 3.4e-06 57.0 212 49.5
CANSAT56G3135 Cannabis sativa HOM05D000071 ORTHO05D000029 4.4e-06 56.6 284 48.9
DCAR_029693 Daucus carota HOM05D000071 ORTHO05D000029 4.4e-06 56.6 194 53.1
Prupe.4G163200 Prunus persica HOM05D001506 ORTHO05D000029 4.4e-06 56.6 90 35.6
Ciclev10017769m.g Citrus clementina HOM05D000071 ORTHO05D000029 5.8e-06 56.2 236 47.5
QL05p014991 Quercus lobata HOM05D000071 ORTHO05D000029 5.8e-06 56.2 210 50.5
Dinv00308 Davidia involucrata HOM05D000071 ORTHO05D000029 7.6e-06 55.8 288 52.1
MD14G1186700 Malus domestica HOM05D000071 ORTHO05D000029 7.6e-06 55.8 203 50.2
Medtr4g040420 Medicago truncatula HOM05D000071 ORTHO05D000029 7.6e-06 55.8 199 52.3
Nn7g36287 Nelumbo nucifera HOM05D000071 ORTHO05D000029 7.6e-06 55.8 229 47.2
QL04p009601 Quercus lobata HOM05D000071 ORTHO05D000029 7.6e-06 55.8 211 48.8
Rhsim10G0009500 Rhododendron simsii HOM05D000071 ORTHO05D000029 7.6e-06 55.8 287 52.6
VMungo0464G1277 Vigna mungo HOM05D000071 ORTHO05D000029 7.6e-06 55.8 235 48.1
Phvul.004G115600 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 9.9e-06 55.5 233 47.6


User provided reference genes

Program Settings