Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 1.7e-76 289.3 149 100.0
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 3.1e-33 145.6 80 88.8
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 9.0e-25 117.5 145 44.1
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 7.6e-24 114.4 145 47.6
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 6.4e-23 111.3 134 47.8
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 8.4e-23 110.9 143 48.3
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 8.4e-23 110.9 146 45.2
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 1.4e-22 110.2 145 46.9
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.9e-22 109.8 103 53.4
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 3.2e-22 109.0 134 47.0
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 3.2e-22 109.0 105 53.3
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 3.2e-22 109.0 103 54.4
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 4.2e-22 108.6 145 44.8
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 7.1e-22 107.8 101 56.4
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 7.1e-22 107.8 101 56.4
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 9.3e-22 107.5 143 45.5
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 1.2e-21 107.1 101 53.5
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 2.1e-21 106.3 122 47.5
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 3.5e-21 105.5 145 44.1
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 6.0e-21 104.8 135 44.4
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 6.0e-21 104.8 136 44.1
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 6.0e-21 104.8 134 44.0
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 6.0e-21 104.8 134 44.0
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 7.8e-21 104.4 103 52.4
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 1.0e-20 104.0 103 52.4
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 1.0e-20 104.0 134 44.0
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 1.3e-20 103.6 145 43.4
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.3e-20 103.6 101 54.5
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 1.3e-20 103.6 105 53.3
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.7e-20 103.2 140 44.3
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 3.9e-20 102.1 138 44.9
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 3.9e-20 102.1 143 42.7
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 3.9e-20 102.1 103 52.4
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 6.6e-20 101.3 122 45.9
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 6.6e-20 101.3 97 52.6
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.1e-19 100.5 138 44.9
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 1.9e-19 99.8 103 50.5
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.5e-19 99.4 103 51.5
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 3.3e-19 99.0 103 51.5
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.3e-19 99.0 103 51.5
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 5.6e-19 98.2 132 41.7
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 5.6e-19 98.2 136 45.6
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 5.6e-19 98.2 105 53.3
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 5.6e-19 98.2 145 38.6
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 7.3e-19 97.8 135 43.7
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 7.3e-19 97.8 103 50.5
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 7.3e-19 97.8 103 50.5
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 1.3e-18 97.1 139 43.9
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 1.3e-18 97.1 101 46.5
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 1.3e-18 97.1 101 52.5
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.6e-18 96.7 98 51.0
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 2.1e-18 96.3 133 43.6
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 2.1e-18 96.3 133 43.6
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 2.8e-18 95.9 100 46.0
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 2.8e-18 95.9 136 41.9
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 2.8e-18 95.9 104 51.0
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 3.6e-18 95.5 145 42.8
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 6.2e-18 94.7 133 42.9
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 6.2e-18 94.7 101 50.5
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 6.2e-18 94.7 108 47.2
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.1e-17 94.0 133 42.9
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.1e-17 94.0 143 42.7
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.1e-17 94.0 100 50.0
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 1.4e-17 93.6 104 48.1
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.4e-17 93.6 137 43.1
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 1.8e-17 93.2 133 39.1
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 1.8e-17 93.2 133 42.1
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 1.8e-17 93.2 132 40.2
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 4.0e-17 92.0 103 50.5
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 5.3e-17 91.7 103 44.7
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 6.9e-17 91.3 130 41.5
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 9.0e-17 90.9 104 48.1
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 9.0e-17 90.9 139 41.0
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 2.0e-16 89.7 139 40.3
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 2.0e-16 89.7 124 46.0
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 5.8e-16 88.2 136 39.0
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 5.8e-16 88.2 123 45.5
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 5.8e-16 88.2 126 42.9
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 7.6e-16 87.8 104 43.3
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 7.6e-16 87.8 98 48.0
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 9.9e-16 87.4 116 40.5
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 9.9e-16 87.4 119 44.5
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.3e-15 87.0 143 41.3
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 1.7e-15 86.7 97 47.4
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.2e-15 86.3 101 41.6
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 3.8e-15 85.5 143 41.3
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 6.4e-15 84.7 145 38.6
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 4.2e-14 82.0 139 41.0
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 5.4e-14 81.6 103 45.6
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 5.4e-14 81.6 133 41.4
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 9.3e-14 80.9 178 33.7
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 4.6e-13 78.6 161 32.9
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 3.0e-12 75.9 123 34.1
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 3.9e-12 75.5 138 37.0
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 5.1e-12 75.1 78 48.7
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 6.7e-12 74.7 88 45.5
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 6.7e-12 74.7 81 48.1
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 8.7e-12 74.3 124 37.9
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.9e-11 73.2 146 36.3
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 1.3e-10 70.5 124 37.1
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 2.1e-10 69.7 121 41.3
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 2.8e-10 69.3 70 54.3
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 4.8e-10 68.6 70 44.3
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 6.2e-10 68.2 102 40.2
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 1.4e-09 67.0 81 48.1
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 5.3e-09 65.1 86 45.3
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 1.5e-08 63.5 137 33.6
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 5.8e-08 61.6 95 43.2
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 9.9e-08 60.8 114 37.7
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 9.9e-08 60.8 101 40.6
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 2.9e-07 59.3 115 33.9
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 2.9e-07 59.3 122 36.9
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 6.4e-07 58.2 102 36.3
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 6.4e-07 58.2 102 36.3
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 6.4e-07 58.2 83 43.4
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 8.4e-07 57.8 143 30.8
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 1.1e-06 57.4 138 33.3
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 1.1e-06 57.4 101 39.6
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 1.4e-06 57.0 105 35.2
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 1.9e-06 56.6 117 34.2
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 2.4e-06 56.2 101 36.6
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 4.2e-06 55.5 83 42.2
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 4.2e-06 55.5 85 41.2
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 5.5e-06 55.1 44 54.5
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 9.3e-06 54.3 74 39.2


User provided reference genes

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