Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 0.0e+00 3073.5 1533 100.0
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.1e-189 667.2 1654 33.6
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.3e-174 618.6 1562 32.3
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.3e-163 582.0 1566 31.3
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 2.3e-163 581.3 1557 31.1
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 3.4e-159 567.4 1531 31.0
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 1.6e-153 548.5 1546 31.1
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.0e-151 541.6 1545 30.4
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.6e-148 530.4 1551 30.3
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 1.7e-147 528.5 1555 30.0
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.5e-146 525.4 1555 30.5
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.5e-146 525.4 1543 30.7
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 7.3e-146 523.1 1560 30.3
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 6.2e-145 520.0 1558 31.2
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 9.8e-143 512.7 1557 29.2
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 9.2e-141 506.1 1549 30.0
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 2.1e-140 505.0 1559 30.3
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.0e-139 502.7 1613 29.3
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 1.0e-139 502.7 1544 29.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.9e-138 498.4 1568 29.5
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.2e-137 493.4 1559 28.9
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.5e-135 488.8 1570 28.7
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 4.9e-134 483.8 1564 30.1
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.6e-132 478.8 1577 28.3
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 7.8e-132 476.5 1528 28.7
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 7.8e-132 476.5 1562 29.6
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 3.0e-131 474.6 1484 30.1
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 6.6e-131 473.4 1564 29.1
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 4.3e-130 470.7 1539 28.4
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 2.1e-129 468.4 1489 29.4
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 8.1e-129 466.5 1607 27.8
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 6.0e-124 450.3 1616 28.8
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.1e-122 446.0 1642 28.1
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 3.1e-120 438.0 1547 29.0
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 2.0e-119 435.3 1552 27.0
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 2.6e-119 434.9 1514 27.5
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 4.4e-119 434.1 1529 28.3
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 4.9e-118 430.6 1537 27.5
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.1e-117 429.5 1519 27.1
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 9.3e-117 426.4 1635 27.5
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 3.5e-116 424.5 1600 26.6
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 7.8e-116 423.3 1546 27.7
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.0e-115 422.9 1558 27.7
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.0e-115 422.9 1558 27.7
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.0e-115 422.9 1517 28.1
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.7e-115 422.2 1606 25.8
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 2.3e-115 421.8 1549 27.4
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 6.6e-115 420.2 1554 26.1
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 1.9e-114 418.7 1535 26.9
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 3.3e-114 417.9 1526 27.1
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 4.3e-114 417.5 1541 27.4
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 9.6e-114 416.4 1530 27.7
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.3e-113 416.0 1532 30.1
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 4.8e-113 414.1 1527 27.4
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 1.4e-112 412.5 1541 26.9
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 1.4e-112 412.5 1535 26.3
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 2.0e-111 408.7 1566 26.6
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 3.4e-111 407.9 1529 27.2
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 8.4e-110 403.3 1578 26.4
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 5.4e-109 400.6 1572 26.5
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 7.1e-109 400.2 1531 26.3
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 2.7e-108 398.3 1529 26.4
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 1.3e-107 396.0 1555 26.2
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.3e-107 396.0 1441 28.6
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 5.1e-107 394.0 1534 26.6
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 1.4e-104 386.0 1591 26.5
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 4.5e-103 380.9 1545 26.9
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.3e-102 379.4 1532 25.8
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 7.1e-101 373.6 1526 26.1
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 2.1e-100 372.1 1549 27.2
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 2.1e-100 372.1 1547 26.4
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 1.0e-99 369.8 1523 25.4
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.3e-97 362.8 1529 25.6
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 6.2e-97 360.5 1563 25.9
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 7.6e-95 353.6 1540 26.2
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 1.1e-93 349.7 1492 26.4
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.9e-93 349.0 1529 25.1
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 7.9e-92 343.6 1525 25.4
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 5.1e-91 340.9 1508 25.4
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 5.7e-90 337.4 1546 26.2
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 4.1e-88 331.3 1343 26.7
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 4.1e-88 331.3 1586 25.2
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.7e-86 325.9 409 43.3
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 4.6e-84 317.8 1557 26.2
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.9e-80 303.9 382 43.7
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 2.6e-79 302.0 433 37.6
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 7.7e-79 300.4 455 39.3
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.0e-74 285.8 292 50.3
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 9.7e-74 283.5 414 37.9
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.7e-73 282.7 1309 25.9
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 5.3e-72 277.7 415 37.3
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 1.2e-71 276.6 1502 24.6
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 9.1e-64 250.4 406 36.0
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.6e-63 249.6 253 54.2
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 3.5e-63 248.4 434 35.3
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 1.8e-59 236.1 243 48.6
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 2.0e-58 232.6 641 32.4
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.4e-56 226.5 410 35.9
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 5.4e-56 224.6 223 47.5
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 4.5e-55 221.5 1546 23.5
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 7.7e-55 220.7 499 36.5
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 6.5e-54 217.6 535 36.1
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 2.0e-50 206.1 206 54.4
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.4e-50 205.3 185 56.2
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 6.3e-49 201.1 223 50.2
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 8.6e-46 190.7 407 29.2
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.3e-41 176.8 183 44.8
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.3e-41 176.8 183 44.8
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.4e-40 173.3 133 60.2
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.3e-38 166.8 115 63.5
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 2.8e-36 159.1 109 66.1
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 2.8e-36 159.1 115 62.6
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 4.0e-35 155.2 193 43.5
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 9.8e-34 150.6 202 40.1
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.7e-30 139.8 82 72.0
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 3.9e-30 138.7 514 27.8
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.2e-28 131.3 86 68.6
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.1e-23 116.3 146 43.2
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.0e-22 114.0 81 64.2
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 6.6e-22 111.3 392 26.3
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.3e-17 97.1 201 32.8
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 2.9e-17 95.9 97 51.5
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.1e-16 92.0 81 55.6
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.5e-15 89.0 68 60.3
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.0e-14 87.4 178 35.4
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 8.6e-14 84.3 66 59.1
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.9e-13 83.2 66 59.1
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 1.2e-12 80.5 123 35.8
Eucgr.G02429 Eucalyptus grandis HOM05D004942 ORTHO05D005687 5.1e-06 58.5 66 40.9


User provided reference genes

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