Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 0.0e+00 1636.3 871 100.0
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 8.3e-256 887.5 931 55.6
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.9e-244 849.7 862 58.0
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 4.0e-242 842.0 872 58.0
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 4.9e-240 835.1 878 55.2
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 2.1e-238 829.7 872 56.5
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 2.5e-236 822.8 866 56.0
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 3.3e-236 822.4 879 57.6
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 9.9e-233 810.8 881 54.1
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 2.2e-232 809.7 872 55.2
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 2.2e-224 783.1 878 53.8
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 4.2e-223 778.9 857 51.9
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 5.5e-223 778.5 880 53.9
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 7.1e-223 778.1 877 54.0
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.6e-222 776.9 875 53.6
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.7e-222 776.2 874 53.2
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.6e-222 775.4 843 54.2
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.3e-221 773.9 857 54.7
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 5.1e-221 771.9 882 54.6
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.8e-218 763.5 876 52.7
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 1.2e-217 760.8 885 53.3
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 1.5e-217 760.4 873 53.4
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.4e-217 759.2 890 51.3
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 3.8e-216 755.7 882 51.0
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 1.2e-214 750.7 887 52.5
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 2.7e-214 749.6 878 52.2
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.0e-213 747.7 887 53.1
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 1.8e-213 746.9 933 50.2
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 3.0e-213 746.1 889 52.3
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.5e-212 743.0 886 50.5
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 4.3e-212 742.3 878 52.2
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 5.7e-212 741.9 878 51.8
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 7.4e-212 741.5 875 53.0
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 7.4e-212 741.5 882 51.7
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 1.6e-211 740.3 887 50.8
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 8.2e-211 738.0 878 51.7
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.8e-210 736.9 866 52.1
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 4.1e-210 735.7 844 51.7
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 9.0e-210 734.6 884 51.6
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.2e-209 734.2 892 50.0
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 4.5e-209 732.3 878 51.4
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 4.5e-209 732.3 879 50.6
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 1.4e-207 727.2 880 49.4
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 2.5e-207 726.5 849 51.5
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 3.0e-205 719.5 877 51.0
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 5.1e-205 718.8 866 50.8
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 8.8e-205 718.0 883 51.2
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.1e-204 717.6 876 50.5
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 5.7e-204 715.3 859 51.0
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.3e-203 714.1 817 53.7
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 1.7e-203 713.8 878 50.2
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 4.1e-202 709.1 878 50.6
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 5.3e-202 708.8 870 51.1
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 1.5e-201 707.2 861 50.1
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 2.0e-201 706.8 872 51.3
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 2.2e-200 703.4 894 49.9
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 8.5e-200 701.4 886 51.1
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 1.4e-199 700.7 880 48.2
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.9e-199 700.3 883 48.7
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 2.7e-198 696.4 880 50.8
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 4.7e-198 695.7 788 53.0
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.0e-197 694.5 874 48.9
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 3.0e-197 693.0 870 49.7
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 5.1e-197 692.2 887 48.8
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 2.0e-196 690.3 874 49.7
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 7.4e-196 688.3 867 50.4
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 3.7e-195 686.0 876 49.5
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 4.8e-195 685.6 868 49.9
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 1.2e-193 681.0 873 48.1
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 2.6e-193 679.9 948 46.3
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 3.5e-193 679.5 873 49.3
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.7e-192 677.2 881 48.9
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 2.2e-192 676.8 874 49.5
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.9e-192 676.4 881 49.1
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 5.0e-192 675.6 870 49.2
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 5.0e-192 675.6 883 49.4
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.9e-191 673.7 910 48.6
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.9e-191 673.7 882 49.3
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.5e-191 673.3 895 48.6
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.6e-190 670.6 878 48.9
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 1.6e-190 670.6 843 47.9
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 2.7e-190 669.8 876 49.2
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 3.6e-190 669.5 892 49.2
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.3e-189 666.8 882 48.2
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 2.0e-188 663.7 873 48.6
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 9.7e-188 661.4 842 48.3
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 9.7e-188 661.4 878 48.4
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 1.3e-187 661.0 915 46.2
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 3.5e-185 652.9 876 48.2
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 8.5e-184 648.3 877 47.7
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.4e-181 641.0 870 49.4
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.1e-178 629.4 877 45.0
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.0e-176 624.8 894 46.5
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 1.0e-173 614.8 894 44.7
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 4.1e-162 576.2 859 43.7
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 8.9e-157 558.5 859 43.5
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 1.2e-140 505.0 449 57.7
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 4.4e-140 503.1 688 48.3
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 1.1e-130 471.9 757 42.0
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 2.1e-126 457.6 913 38.4
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 4.0e-125 453.4 394 58.6
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.1e-118 431.0 547 53.4
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 9.3e-114 415.6 601 43.4
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.1e-113 414.5 476 54.6
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 4.6e-113 413.3 589 45.5
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 3.9e-112 410.2 530 49.2
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 9.1e-85 319.3 597 39.9
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.2e-78 298.1 264 61.7
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-76 292.4 390 51.3
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 9.1e-69 266.2 268 55.6
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 2.9e-67 261.2 262 51.9
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 8.0e-65 253.1 901 29.1
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 5.0e-59 233.8 314 50.6
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.9e-58 231.9 272 52.9
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.8e-45 188.7 260 48.8
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 2.4e-45 188.3 1099 25.0
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 1.3e-43 182.6 257 47.1
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 5.0e-43 180.6 239 46.9
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.3e-40 171.8 196 49.0
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 1.9e-37 162.2 318 37.4
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 2.7e-36 158.3 337 39.5
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 5.0e-35 154.1 633 27.2
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 6.4e-30 137.1 774 26.0
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 3.6e-25 121.3 97 56.7
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 4.7e-25 120.9 315 36.2
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.7e-25 120.9 114 61.4
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 5.8e-23 114.0 115 49.6
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 5.8e-23 114.0 91 64.8
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 1.7e-22 112.5 112 50.9
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 2.9e-22 111.7 91 64.8
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 3.0e-19 101.7 93 59.1
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 8.6e-19 100.1 90 57.8
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 4.0e-16 91.3 172 41.3
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 5.8e-15 87.4 71 67.6
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 6.0e-12 77.4 67 59.7
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 5.1e-11 74.3 54 66.7
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.3e-10 71.2 63 61.9
AagrBONN_evm.TU.Sc2ySwM_228.4285 Anthoceros agrestis HOM05D004844 ORTHO05D074214 5.6e-10 70.9 95 49.5
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 5.6e-10 70.9 58 63.8
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 6.2e-09 67.4 86 51.2
SEGI_23631 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 6.2e-09 67.4 47 76.6
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.4e-08 65.5 58 58.6
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.4e-08 65.5 63 58.7
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.0e-07 62.4 62 56.5
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 6.4e-06 57.4 209 25.4


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