Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 4.8e-146 521.2 266 100.0
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 8.1e-77 291.2 239 65.7
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 6.8e-76 288.1 237 65.4
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 6.8e-76 288.1 236 66.9
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 8.9e-76 287.7 234 65.4
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 2.0e-75 286.6 240 64.2
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 9.9e-75 284.3 201 68.7
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.7e-74 283.5 238 62.2
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.7e-74 283.5 178 79.2
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 2.9e-74 282.7 180 76.7
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 2.9e-74 282.7 238 63.0
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.9e-74 282.7 201 69.2
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 3.8e-74 282.3 238 63.0
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.8e-74 282.3 201 69.2
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 6.4e-74 281.6 237 63.7
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 8.4e-74 281.2 181 76.2
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 8.4e-74 281.2 201 68.7
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 8.4e-74 281.2 201 68.7
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.1e-73 280.8 201 68.7
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.1e-73 280.8 231 65.4
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 5.4e-73 278.5 176 77.8
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 5.4e-73 278.5 246 59.8
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 7.1e-73 278.1 233 63.5
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 7.1e-73 278.1 243 63.0
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 9.2e-73 277.7 192 70.3
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 3.5e-72 275.8 235 63.4
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 3.5e-72 275.8 244 60.2
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 3.5e-72 275.8 238 60.9
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 6.0e-72 275.0 240 60.4
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 6.0e-72 275.0 245 61.2
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 6.0e-72 275.0 237 62.0
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 7.8e-72 274.6 244 61.9
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 7.8e-72 274.6 244 61.5
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 1.0e-71 274.2 232 62.5
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 1.3e-71 273.9 249 60.2
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 1.3e-71 273.9 245 62.4
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.3e-71 273.9 237 61.2
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.3e-71 273.9 240 62.5
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.7e-71 273.5 194 71.1
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 1.7e-71 273.5 182 74.7
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 1.7e-71 273.5 182 74.7
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 3.0e-71 272.7 180 73.9
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 1.5e-70 270.4 236 62.3
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.5e-70 269.6 188 72.3
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 3.3e-70 269.2 181 71.8
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 5.6e-70 268.5 180 73.3
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 7.3e-70 268.1 202 66.8
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 9.6e-70 267.7 240 59.2
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.6e-69 266.9 227 63.4
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.6e-69 266.9 188 71.8
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.6e-69 266.9 241 59.8
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 2.1e-69 266.5 242 59.9
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.1e-69 266.5 219 63.0
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.1e-69 266.5 240 58.8
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 2.8e-69 266.2 238 60.9
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 3.6e-69 265.8 206 68.0
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.1e-68 264.2 168 76.2
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.4e-68 263.8 239 59.0
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.4e-68 263.8 239 61.1
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.8e-68 263.5 237 61.2
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 2.4e-68 263.1 192 68.2
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 2.4e-68 263.1 203 66.5
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 6.9e-68 261.5 233 61.8
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 1.2e-67 260.8 179 74.9
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 1.5e-67 260.4 240 57.9
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 7.6e-67 258.1 277 54.5
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 7.6e-67 258.1 236 58.5
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 3.8e-66 255.8 230 61.3
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.1e-65 254.2 211 63.0
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.4e-65 253.8 237 57.8
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.4e-65 253.1 158 79.7
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 5.4e-65 251.9 239 55.6
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 5.4e-65 251.9 157 77.7
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 9.3e-65 251.1 157 77.7
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 2.1e-64 250.0 160 77.5
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 2.7e-64 249.6 179 68.7
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 4.6e-64 248.8 224 59.8
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 6.0e-64 248.4 237 57.0
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 7.8e-64 248.1 244 57.0
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 7.8e-64 248.1 162 74.1
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 7.8e-64 248.1 227 59.0
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 1.0e-63 247.7 227 59.9
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 3.9e-63 245.7 243 56.4
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 8.7e-63 244.6 160 75.6
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.1e-62 244.2 197 59.4
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 4.3e-62 242.3 241 57.3
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 7.3e-62 241.5 183 64.5
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.1e-57 227.6 159 71.1
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 1.3e-55 220.7 145 73.8
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 6.7e-55 218.4 140 75.7
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 3.3e-54 216.1 239 52.7
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 3.3e-54 216.1 200 58.0
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 7.4e-54 214.9 138 78.3
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 2.1e-53 213.4 138 77.5
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.8e-53 212.2 235 49.4
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.1e-49 201.1 140 71.4
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 2.1e-48 196.8 251 45.0
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 1.8e-47 193.7 126 78.6
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 1.9e-46 190.3 232 46.1
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 3.7e-45 186.0 175 51.4
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 3.1e-44 183.0 203 48.3
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 7.6e-43 178.3 235 46.4
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 1.4e-41 174.1 95 84.2
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 8.7e-39 164.9 194 45.4
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 6.3e-37 158.7 233 44.2
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.5e-35 154.1 145 60.0
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 3.4e-35 152.9 142 59.2
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 4.5e-35 152.5 138 62.3
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.9e-31 139.4 153 51.6
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.5e-30 136.7 93 72.0
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 4.3e-30 136.0 157 43.3
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 2.9e-18 96.7 57 80.7
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 8.8e-15 85.1 186 30.1
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 4.1e-12 76.3 133 27.8
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 6.5e-10 68.9 104 41.3
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 1.9e-09 67.4 102 42.2


User provided reference genes

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