Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 0.0e+00 1233.8 639 100.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 1.3e-178 630.6 607 58.8
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 7.2e-172 608.2 544 61.2
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 3.0e-170 602.8 569 58.2
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 7.4e-169 598.2 569 57.8
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.2e-166 590.9 581 58.7
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 3.3e-161 572.8 619 53.2
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 4.4e-161 572.4 628 54.9
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 5.7e-161 572.0 619 53.3
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 1.4e-159 567.4 611 54.8
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.1e-159 565.8 549 58.1
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.6e-158 563.1 565 56.1
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.0e-157 561.2 557 56.9
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.9e-157 559.7 650 53.1
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 3.8e-157 559.3 557 56.7
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 1.9e-156 557.0 669 50.8
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 2.5e-156 556.6 611 54.5
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 4.2e-156 555.8 554 56.7
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 3.6e-155 552.7 557 55.3
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 2.3e-154 550.1 543 58.0
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 1.2e-153 547.7 557 56.0
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.2e-153 547.7 554 56.5
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 3.3e-153 546.2 565 55.4
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 3.3e-153 546.2 565 55.4
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 1.3e-152 544.3 548 57.5
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 2.2e-152 543.5 554 56.5
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 3.7e-152 542.7 543 55.4
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 3.7e-152 542.7 546 55.5
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.8e-152 542.3 560 54.8
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 8.2e-152 541.6 572 54.0
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.2e-152 541.6 561 56.0
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.4e-151 540.8 555 55.7
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.4e-151 540.8 710 48.3
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.8e-151 540.4 593 53.3
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.8e-151 540.4 566 55.3
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 5.3e-151 538.9 575 55.1
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 7.0e-151 538.5 580 53.3
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 7.0e-151 538.5 578 52.8
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 9.1e-151 538.1 575 53.6
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 9.1e-151 538.1 568 55.1
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 4.5e-150 535.8 578 53.1
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 5.9e-150 535.4 547 55.6
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.9e-150 535.4 576 55.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.0e-149 534.6 556 54.3
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.7e-149 533.9 560 54.8
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 2.2e-149 533.5 546 54.9
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.2e-149 533.5 576 53.3
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 2.9e-149 533.1 637 51.0
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 3.8e-149 532.7 550 55.1
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 3.8e-149 532.7 551 54.6
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 5.0e-149 532.3 563 52.9
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 6.5e-149 531.9 545 54.3
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 8.5e-149 531.6 551 55.0
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.1e-148 531.2 575 52.9
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 1.2e-147 527.7 545 54.1
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 2.7e-147 526.6 546 54.4
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 3.6e-147 526.2 571 53.1
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.1e-147 525.4 576 53.1
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 8.0e-147 525.0 567 53.8
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 3.0e-146 523.1 585 52.5
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 4.0e-146 522.7 631 50.1
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 5.2e-146 522.3 579 53.4
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 6.8e-146 521.9 556 52.7
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 1.5e-145 520.8 549 54.5
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 2.6e-145 520.0 549 54.8
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.4e-145 519.2 577 52.2
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 8.3e-144 515.0 545 54.3
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 2.0e-142 510.4 568 52.8
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 2.0e-142 510.4 549 54.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 3.8e-141 506.1 547 53.7
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 5.0e-141 505.8 571 52.4
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 8.0e-139 498.4 580 51.6
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 4.0e-138 496.1 554 50.9
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 6.8e-138 495.4 614 48.5
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.3e-136 491.1 560 52.5
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.7e-136 490.7 653 48.4
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.2e-136 490.3 629 48.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 4.9e-136 489.2 556 49.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.2e-134 484.6 583 50.8
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.5e-124 451.1 552 48.9
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.1e-123 447.2 506 53.6
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 4.7e-123 446.0 473 54.1
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 8.6e-117 425.2 476 52.5
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.2e-112 410.6 475 50.7
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 4.6e-110 402.9 550 46.5
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.7e-99 366.3 574 42.5
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 9.0e-98 362.1 337 58.2
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 4.3e-92 343.2 477 45.9
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 2.8e-91 340.5 410 53.2
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.0e-89 334.3 590 38.3
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 5.8e-89 332.8 431 47.8
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 3.2e-87 327.0 431 47.6
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 9.6e-84 315.5 378 49.2
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.1e-82 310.5 515 40.4
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.4e-80 302.4 413 47.7
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 8.7e-77 292.4 414 45.9
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.5e-76 291.6 395 44.8
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 2.9e-56 224.2 546 33.2
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.1e-55 222.2 253 49.4
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 4.8e-43 180.3 169 58.6
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 3.1e-34 151.0 343 31.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.2e-32 144.8 129 58.1
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 1.9e-31 141.7 117 60.7
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 2.8e-27 127.9 167 46.1
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.4e-26 125.6 145 48.3
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.8e-26 125.2 131 50.4
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 4.1e-26 124.0 95 67.4
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.3e-23 114.4 99 58.6
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 1.5e-15 89.0 191 33.0
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.3e-15 87.4 80 53.8
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.4e-13 82.4 48 79.2
MCO12G226 Micromonas commoda HOM05D006816 ORTHO05D008666 2.7e-09 68.2 488 21.3
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 6.0e-09 67.0 85 50.6
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 6.6e-08 63.5 80 50.0


User provided reference genes

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