Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 0.0e+00 1242.6 631 100.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.7e-221 773.1 639 64.6
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.0e-218 763.8 647 62.8
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 4.7e-200 701.8 652 58.6
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 4.7e-200 701.8 581 62.3
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 8.3e-197 691.0 652 57.7
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 2.4e-196 689.5 638 57.1
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 3.2e-196 689.1 655 56.5
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 5.0e-194 681.8 643 56.6
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 7.3e-193 677.9 646 56.2
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 5.2e-191 671.8 658 55.2
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 6.8e-191 671.4 653 55.9
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 6.8e-191 671.4 638 54.5
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 4.4e-190 668.7 661 55.5
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 3.7e-189 665.6 647 54.3
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.1e-188 664.1 645 56.0
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 2.1e-187 659.8 650 54.8
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 3.5e-187 659.1 637 55.9
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 4.6e-187 658.7 623 56.2
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.0e-186 657.5 639 54.9
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 2.3e-186 656.4 633 55.1
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 3.0e-186 656.0 651 54.7
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 3.0e-186 656.0 656 54.6
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.1e-186 655.2 652 54.0
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.1e-185 654.1 653 55.4
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 3.3e-185 652.5 656 54.4
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 4.3e-185 652.1 644 55.9
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 5.6e-185 651.7 645 56.0
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 6.2e-184 648.3 649 54.9
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.4e-183 647.1 642 53.7
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.4e-183 647.1 648 53.9
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.3e-183 646.4 645 55.3
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 3.1e-183 646.0 642 54.2
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 5.2e-183 645.2 648 52.6
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 6.8e-183 644.8 642 54.4
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.5e-182 643.7 679 52.3
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 5.8e-182 641.7 679 52.1
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 5.8e-182 641.7 649 53.9
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.8e-182 641.7 669 51.7
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 1.3e-181 640.6 626 54.3
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.9e-181 639.4 649 53.3
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 2.9e-181 639.4 649 54.5
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.7e-181 639.0 637 53.7
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 6.4e-181 638.3 625 56.3
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.1e-180 637.5 634 54.4
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.4e-180 637.1 647 52.9
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.4e-180 637.1 637 53.7
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 3.2e-180 636.0 637 53.8
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 5.4e-180 635.2 647 52.4
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 7.1e-180 634.8 637 53.5
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 1.6e-179 633.6 658 53.6
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.6e-179 632.1 689 51.4
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 7.8e-179 631.3 645 53.0
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.0e-178 630.9 629 54.8
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.3e-178 630.6 647 53.9
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.3e-178 629.8 647 53.2
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 3.9e-178 629.0 616 55.2
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 2.5e-177 626.3 642 52.6
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.5e-177 626.3 667 52.3
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 2.5e-177 626.3 632 54.3
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.4e-175 619.8 646 54.3
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.4e-175 619.8 646 54.3
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 2.4e-175 619.8 530 57.0
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.6e-174 616.3 637 53.5
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.6e-174 616.3 643 53.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 8.4e-173 611.3 644 52.8
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.1e-172 610.9 650 52.5
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.4e-172 610.5 647 52.1
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-172 609.4 635 51.0
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 4.2e-172 609.0 631 52.5
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 9.2e-172 607.8 518 59.5
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.6e-171 607.1 649 52.1
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 2.7e-171 606.3 645 53.2
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.7e-170 603.6 632 50.8
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-170 602.4 479 59.3
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-170 602.4 479 59.3
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 8.7e-170 601.3 439 65.6
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 8.7e-170 601.3 646 52.8
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.9e-169 600.1 639 50.2
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 3.3e-169 599.4 645 53.5
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 4.7e-168 595.5 638 50.6
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 6.2e-168 595.1 635 53.1
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.1e-167 594.3 642 51.2
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 4.0e-167 592.4 644 50.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.2e-166 590.9 639 49.8
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.2e-165 586.6 644 49.5
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 4.9e-165 585.5 647 50.5
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 5.4e-164 582.0 648 50.9
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-163 580.9 643 49.5
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 4.6e-163 578.9 643 50.5
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.0e-162 576.2 523 54.5
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 2.8e-160 569.7 643 48.4
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.9e-159 565.1 464 57.1
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 9.0e-159 564.7 645 48.5
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 5.6e-153 545.4 631 49.3
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 6.9e-151 538.5 614 48.9
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 6.4e-149 531.9 550 53.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 8.7e-146 521.5 390 61.3
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 7.9e-139 498.4 529 51.6
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.4e-132 477.6 646 44.3
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 8.2e-128 461.8 357 61.1
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 3.2e-124 449.9 351 59.8
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 5.1e-122 442.6 462 48.5
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.5e-121 441.0 542 45.2
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.1e-119 433.3 643 40.1
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.0e-118 430.6 587 43.4
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 7.7e-118 428.7 482 46.7
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 2.1e-83 314.3 684 30.7
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 6.8e-82 309.3 521 34.7
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 3.0e-61 240.7 509 31.2
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 4.8e-51 206.8 529 28.9
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.8e-42 178.3 417 29.5
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 8.2e-27 126.3 100 57.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 8.2e-27 126.3 100 57.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 7.6e-25 119.8 98 56.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.5e-20 105.5 385 24.9


User provided reference genes

Program Settings