Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 9.6e-86 320.1 157 100.0
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 1.0e-10 70.9 75 53.3
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 1.3e-10 70.5 89 44.9
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 2.3e-10 69.7 83 51.8
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 2.9e-10 69.3 86 50.0
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 8.6e-10 67.8 82 48.8
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 1.1e-09 67.4 70 55.7
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 1.5e-09 67.0 81 49.4
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 1.5e-09 67.0 85 50.6
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 3.3e-09 65.9 71 59.2
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 4.3e-09 65.5 103 45.6
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 5.6e-09 65.1 79 51.9
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 7.3e-09 64.7 85 49.4
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 7.3e-09 64.7 84 48.8
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 9.5e-09 64.3 85 47.1
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 9.5e-09 64.3 60 58.3
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 1.6e-08 63.5 79 53.2
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 1.6e-08 63.5 56 64.3
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.1e-08 63.2 127 37.8
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 2.1e-08 63.2 84 46.4
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.8e-08 62.8 62 61.3
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 2.8e-08 62.8 84 45.2
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 2.8e-08 62.8 75 48.0
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 2.8e-08 62.8 85 51.8
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 3.6e-08 62.4 54 61.1
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 3.6e-08 62.4 62 54.8
DCAR_008749 Daucus carota HOM05D006736 ORTHO05D008459 3.6e-08 62.4 72 41.7
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 3.6e-08 62.4 77 46.8
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 3.6e-08 62.4 71 47.9
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 4.7e-08 62.0 95 43.2
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 6.1e-08 61.6 75 48.0
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 1.0e-07 60.8 58 62.1
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.0e-07 60.8 52 61.5
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 1.4e-07 60.5 67 53.7
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.4e-07 60.5 49 71.4
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.4e-07 60.5 49 71.4
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 1.4e-07 60.5 39 76.9
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 1.4e-07 60.5 85 42.4
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 1.4e-07 60.5 96 42.7
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 1.4e-07 60.5 76 50.0
BcaB01g04378 Brassica carinata HOM05D006736 ORTHO05D008459 1.8e-07 60.1 65 44.6
Sp6g17830 Schrenkiella parvula HOM05D006736 ORTHO05D008459 1.8e-07 60.1 76 40.8
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.8e-07 60.1 63 57.1
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 2.3e-07 59.7 56 60.7
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 2.3e-07 59.7 58 62.1
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 2.3e-07 59.7 85 49.4
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 2.3e-07 59.7 68 50.0
Carub.0008s1632 Capsella rubella HOM05D006736 ORTHO05D008459 3.0e-07 59.3 89 39.3
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 3.0e-07 59.3 40 72.5
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 3.0e-07 59.3 57 61.4
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 3.0e-07 59.3 57 61.4
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 3.0e-07 59.3 57 61.4
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 3.0e-07 59.3 51 66.7
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 3.0e-07 59.3 44 65.9
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 3.0e-07 59.3 58 56.9
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 3.0e-07 59.3 40 60.0
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 4.0e-07 58.9 61 50.8
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 4.0e-07 58.9 79 49.4
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 4.0e-07 58.9 84 46.4
BcaC04g20175 Brassica carinata HOM05D006736 ORTHO05D008459 5.2e-07 58.5 78 44.9
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 5.2e-07 58.5 62 53.2
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 5.2e-07 58.5 58 60.3
C09p46970 Brassica napus HOM05D006736 ORTHO05D008459 6.8e-07 58.2 78 44.9
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 8.9e-07 57.8 70 45.7
BolC9t57545H Brassica oleracea HOM05D006736 ORTHO05D008459 8.9e-07 57.8 78 44.9
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 8.9e-07 57.8 44 56.8
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 8.9e-07 57.8 75 46.7
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 1.2e-06 57.4 59 54.2
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 1.2e-06 57.4 67 41.8
Aqoxy4G01886 Aquilegia oxysepala HOM05D006736 ORTHO05D008459 1.5e-06 57.0 29 82.8
BcaB08g35964 Brassica carinata HOM05D006736 ORTHO05D008459 1.5e-06 57.0 78 44.9
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 1.5e-06 57.0 84 45.2
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 1.5e-06 57.0 43 72.1
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla HOM05D006736 ORTHO05D008459 1.5e-06 57.0 66 43.9
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 1.5e-06 57.0 62 51.6
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 1.5e-06 57.0 66 53.0
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 2.0e-06 56.6 112 37.5
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 2.0e-06 56.6 112 37.5
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 2.0e-06 56.6 37 62.2
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 2.0e-06 56.6 80 47.5
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 2.0e-06 56.6 86 41.9
Eucgr.F02027 Eucalyptus grandis HOM05D006736 ORTHO05D008459 2.0e-06 56.6 89 47.2
Thhalv10015819m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 2.0e-06 56.6 76 40.8
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 2.6e-06 56.2 55 60.0
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 2.6e-06 56.2 56 58.9
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 2.6e-06 56.2 56 58.9
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 2.6e-06 56.2 56 58.9
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 2.6e-06 56.2 90 45.6
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 2.6e-06 56.2 76 50.0
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 2.6e-06 56.2 61 47.5
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 2.6e-06 56.2 41 63.4
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 3.4e-06 55.8 57 59.6
FAN07G0181 Fragaria x ananassa HOM05D007247 ORTHO05D009208 3.4e-06 55.8 97 45.4
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 3.4e-06 55.8 44 68.2
CSS0010283 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 4.4e-06 55.5 41 61.0
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 4.4e-06 55.5 77 45.5
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 4.4e-06 55.5 65 53.8
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 4.4e-06 55.5 48 64.6
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 4.4e-06 55.5 54 53.7
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 4.4e-06 55.5 82 42.7
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 4.4e-06 55.5 49 63.3
DCAR_024425 Daucus carota HOM05D000669 ORTHO05D000679 5.8e-06 55.1 48 62.5
FvH4_4g25640 Fragaria vesca HOM05D007247 ORTHO05D009208 5.8e-06 55.1 97 45.4
HanXRQChr03g0080371 Helianthus annuus HOM05D007247 ORTHO05D009208 5.8e-06 55.1 64 43.8
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 5.8e-06 55.1 80 40.0
GSVIVG01014741001 Vitis vinifera HOM05D006736 ORTHO05D008459 5.8e-06 55.1 92 35.9
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 7.5e-06 54.7 48 64.6
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 7.5e-06 54.7 48 64.6
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 7.5e-06 54.7 48 64.6
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 7.5e-06 54.7 93 39.8
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 7.5e-06 54.7 76 46.1
FAN12G2765 Fragaria x ananassa HOM05D007247 ORTHO05D009208 7.5e-06 54.7 97 45.4
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 7.5e-06 54.7 42 66.7
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 7.5e-06 54.7 46 69.6
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 7.5e-06 54.7 62 56.5
AT5G55980 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 9.8e-06 54.3 61 45.9
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 9.8e-06 54.3 75 44.0
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 9.8e-06 54.3 50 62.0
Lsat_1_v5_gn_9_89061 Lactuca sativa HOM05D007247 ORTHO05D009208 9.8e-06 54.3 39 61.5
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 9.8e-06 54.3 79 45.6
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 9.8e-06 54.3 80 40.0


User provided reference genes

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