Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G148 Amborella trichopoda HOM05D000169 ORTHO05D066726 1.3e-51 206.1 102 100.0
ATR0824G206 Amborella trichopoda HOM05D000169 ORTHO05D000542 5.7e-31 137.5 97 69.1
ATR0594G203 Amborella trichopoda HOM05D000169 ORTHO05D000542 8.3e-30 133.7 98 70.4
ATR0824G167 Amborella trichopoda HOM05D000169 ORTHO05D000542 9.1e-29 130.2 98 66.3
SalBow7G0447 Salvia bowleyana HOM05D000169 ORTHO05D000542 5.0e-11 71.2 101 40.6
Peaxi162Scf00700g00139 Petunia axillaris HOM05D000169 ORTHO05D000542 6.6e-11 70.9 101 39.6
QL02p072573 Quercus lobata HOM05D000169 ORTHO05D000542 1.1e-10 70.1 101 40.6
QL02p072496 Quercus lobata HOM05D000169 ORTHO05D000542 7.3e-10 67.4 101 37.6
SGA_v2.0_scaffold47G17580 Striga asiatica HOM05D000169 ORTHO05D000542 7.3e-10 67.4 100 43.0
Peaxi162Scf00691g00518 Petunia axillaris HOM05D000169 ORTHO05D000542 9.5e-10 67.0 101 38.6
Migut.K01444 Erythranthe guttata HOM05D000169 ORTHO05D000542 1.6e-09 66.2 99 38.4
Atru.chr6.2510 Acer truncatum HOM05D000169 ORTHO05D000542 6.2e-09 64.3 104 35.6
Cfa007257 Carpinus fangiana HOM05D000169 ORTHO05D000542 6.2e-09 64.3 99 37.4
Haze_14830 Corylus avellana HOM05D005656 ORTHO05D007094 8.0e-09 63.9 101 35.6
Potri.017G033600 Populus trichocarpa HOM05D000169 ORTHO05D000542 8.0e-09 63.9 101 38.6
Thecc.04G029700 Theobroma cacao HOM05D000169 ORTHO05D000542 1.4e-08 63.2 100 38.0
Sabra17G0021100 Salix brachista HOM05D000169 ORTHO05D000542 1.8e-08 62.8 101 38.6
Sc03g0006830 Simmondsia chinensis HOM05D000169 ORTHO05D000542 2.3e-08 62.4 104 39.4
Lju41C49T11 Lonicera japonica HOM05D000169 ORTHO05D000542 4.0e-08 61.6 101 35.6
Nitab4.5_0000559g0220 Nicotiana tabacum HOM05D000169 ORTHO05D000542 4.0e-08 61.6 99 36.4
Nitab4.5_0006819g0070 Nicotiana tabacum HOM05D000169 ORTHO05D000542 4.0e-08 61.6 100 37.0
Dinv33370 Davidia involucrata HOM05D000169 ORTHO05D000542 6.8e-08 60.8 101 34.7
Medtr1g073180 Medicago truncatula HOM05D000169 ORTHO05D000542 6.8e-08 60.8 78 43.6
Atru.chr6.2509 Acer truncatum HOM05D000169 ORTHO05D000542 1.2e-07 60.1 85 36.5
Dinv16469 Davidia involucrata HOM05D000169 ORTHO05D000542 1.2e-07 60.1 103 35.9
TPR.G1101 Trifolium pratense HOM05D000169 ORTHO05D000542 1.2e-07 60.1 85 38.8
CAN.G1965.12 Capsicum annuum HOM05D000169 ORTHO05D000542 1.5e-07 59.7 99 34.3
QL03p054621 Quercus lobata HOM05D000169 ORTHO05D000542 1.5e-07 59.7 102 31.4
ATR0824G100 Amborella trichopoda HOM05D000169 ORTHO05D000542 2.0e-07 59.3 97 36.1
Duzib264G1255 Durio zibethinus HOM05D000169 ORTHO05D000542 2.0e-07 59.3 77 41.6
Eucgr.B03468 Eucalyptus grandis HOM05D000169 ORTHO05D000542 2.0e-07 59.3 77 42.9
ATR0824G056 Amborella trichopoda HOM05D000169 ORTHO05D000542 2.6e-07 58.9 100 36.0
CSS0014735 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D000542 3.4e-07 58.5 102 34.3
arahy.Tifrunner.gnm1.ann1.7MKL11 Arachis hypogaea HOM05D000169 ORTHO05D000542 4.4e-07 58.2 85 37.6
Solyc03g005090.4 Solanum lycopersicum HOM05D002210 ORTHO05D002304 4.4e-07 58.2 99 36.4
DCAR_002953 Daucus carota HOM05D000169 ORTHO05D000542 5.8e-07 57.8 83 34.9
Hma1.2p1_0167F.1_g073700 Hydrangea macrophylla HOM05D000169 ORTHO05D000542 5.8e-07 57.8 79 41.8
arahy.Tifrunner.gnm1.ann1.1DT180 Arachis hypogaea HOM05D000169 ORTHO05D000542 7.5e-07 57.4 85 36.5
Ciclev10014804m.g Citrus clementina HOM05D000169 ORTHO05D000542 7.5e-07 57.4 77 37.7
COL.COLO4_12815 Corchorus olitorius HOM05D000169 ORTHO05D000542 7.5e-07 57.4 84 35.7
PSO782G2012 Papaver somniferum HOM05D000169 ORTHO05D000542 7.5e-07 57.4 110 28.2
Migut.K00705 Erythranthe guttata HOM05D000169 ORTHO05D000542 9.8e-07 57.0 102 32.4
QL02p072555 Quercus lobata HOM05D000169 ORTHO05D000542 9.8e-07 57.0 103 35.9
Sopen03g001090 Solanum pennellii HOM05D000169 ORTHO05D000542 9.8e-07 57.0 99 35.4
Lj1g0004501 Lotus japonicus HOM05D000169 ORTHO05D000542 1.7e-06 56.2 101 34.7
Lj1g0008000 Lotus japonicus HOM05D000169 ORTHO05D000542 1.7e-06 56.2 99 31.3
Nn3g16531 Nelumbo nucifera HOM05D000169 ORTHO05D000542 1.7e-06 56.2 103 34.0
Nitab4.5_0001664g0060 Nicotiana tabacum HOM05D000169 ORTHO05D000542 1.7e-06 56.2 108 29.6
PSO210G3813 Papaver somniferum HOM05D000169 ORTHO05D000542 1.7e-06 56.2 110 31.8
arahy.Tifrunner.gnm1.ann1.L700WL Arachis hypogaea HOM05D000169 ORTHO05D000542 2.2e-06 55.8 81 32.1
Ca_27155_v3 Cicer arietinum L. HOM05D000169 ORTHO05D000542 2.2e-06 55.8 85 38.8
Duzib251G0320 Durio zibethinus HOM05D000169 ORTHO05D000542 2.2e-06 55.8 82 39.0
Nitab4.5_0003680g0060 Nicotiana tabacum HOM05D000169 ORTHO05D000542 2.2e-06 55.8 108 28.7
QL10p004496 Quercus lobata HOM05D000169 ORTHO05D000542 2.2e-06 55.8 85 31.8
RcHm_v2.0_Chr7g0190681 Rosa chinensis HOM05D000169 ORTHO05D000542 2.2e-06 55.8 99 29.3
MD14G1161200 Malus domestica HOM05D000169 ORTHO05D000542 2.9e-06 55.5 106 29.2
FAN07G0143 Fragaria x ananassa HOM05D000169 ORTHO05D000542 3.7e-06 55.1 101 34.7
Potri.010G057000 Populus trichocarpa HOM05D000169 ORTHO05D000542 3.7e-06 55.1 103 35.0
PGR083G2761 Punica granatum HOM05D000169 ORTHO05D000542 3.7e-06 55.1 113 29.2
TAR374G0540 Trochodendron aralioides HOM05D000169 ORTHO05D000542 3.7e-06 55.1 105 32.4
arahy.Tifrunner.gnm1.ann1.DK6AU1 Arachis hypogaea HOM05D000169 ORTHO05D000542 4.9e-06 54.7 81 30.9
Dinv10987 Davidia involucrata HOM05D000169 ORTHO05D000542 4.9e-06 54.7 86 36.0
FAN22G2259 Fragaria x ananassa HOM05D000169 ORTHO05D000542 4.9e-06 54.7 101 34.7
QL02p072536 Quercus lobata HOM05D000169 ORTHO05D000542 4.9e-06 54.7 75 40.0
Aqoxy3G01463 Aquilegia oxysepala HOM05D000169 ORTHO05D000542 6.4e-06 54.3 102 31.4
CANSAT01G2828 Cannabis sativa HOM05D000169 ORTHO05D000542 6.4e-06 54.3 102 27.5
FvH4_4g24170 Fragaria vesca HOM05D000169 ORTHO05D000542 6.4e-06 54.3 101 35.6
Atru.chr9.1039 Acer truncatum HOM05D000169 ORTHO05D000542 8.3e-06 53.9 81 32.1
ATR0661G210 Amborella trichopoda HOM05D000169 ORTHO05D000542 8.3e-06 53.9 101 35.6
Duzib268G1839 Durio zibethinus HOM05D000169 ORTHO05D000542 8.3e-06 53.9 82 39.0
TAR622G0162 Trochodendron aralioides HOM05D000169 ORTHO05D000542 8.3e-06 53.9 72 41.7
HPP92_013533 Vanilla planifolia HOM05D000169 ORTHO05D000542 8.3e-06 53.9 101 32.7


User provided reference genes

Program Settings