Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G121 Amborella trichopoda HOM05D004405 ORTHO05D005613 1.9e-127 459.1 231 100.0
MBI06_g04501_MAGBIO Magnolia biondii HOM05D004405 ORTHO05D005613 5.6e-74 281.6 182 75.8
Hma1.2p1_0982F.1_g243850 Hydrangea macrophylla HOM05D004405 ORTHO05D005613 1.2e-71 273.9 239 59.4
TAR381G0414 Trochodendron aralioides HOM05D004405 ORTHO05D005613 2.6e-71 272.7 212 65.6
vmacro21541 Vaccinium macrocarpon HOM05D004405 ORTHO05D005613 4.4e-71 271.9 181 74.0
QL02p005410 Quercus lobata HOM05D004405 ORTHO05D005613 2.2e-70 269.6 240 57.5
Lj5C9T2 Lonicera japonica HOM05D004405 ORTHO05D005613 1.4e-69 266.9 178 73.0
Thecc.08G011300 Theobroma cacao HOM05D004405 ORTHO05D005613 1.4e-69 266.9 233 60.1
Dinv35974 Davidia involucrata HOM05D004405 ORTHO05D005613 2.4e-69 266.2 181 73.5
Lj5C589T2 Lonicera japonica HOM05D004405 ORTHO05D005613 2.4e-69 266.2 176 73.3
Duzib093G0211 Durio zibethinus HOM05D004405 ORTHO05D005613 4.1e-69 265.4 214 65.9
Lj4A775T68 Lonicera japonica HOM05D004405 ORTHO05D005613 4.1e-69 265.4 176 72.7
Actinidia23262 Actinidia chinensis HOM05D004405 ORTHO05D005613 5.4e-69 265.0 176 73.9
Eucgr.F00243 Eucalyptus grandis HOM05D004405 ORTHO05D005613 2.0e-68 263.1 213 62.0
Solyc04g079180.3 Solanum lycopersicum HOM05D004405 ORTHO05D005613 2.7e-68 262.7 241 57.3
Nn1g05838 Nelumbo nucifera HOM05D004405 ORTHO05D005613 6.0e-68 261.5 177 72.3
Haze_17546 Corylus avellana HOM05D004405 ORTHO05D005613 7.8e-68 261.2 241 55.6
Haze_17555 Corylus avellana HOM05D004405 ORTHO05D005613 7.8e-68 261.2 241 55.6
Aqoxy5G01271 Aquilegia oxysepala HOM05D004405 ORTHO05D005613 1.0e-67 260.8 223 60.5
CSS0002613 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.0e-67 260.8 181 71.3
Nn5g30223 Nelumbo nucifera HOM05D004405 ORTHO05D005613 1.0e-67 260.8 211 64.9
Duzib116G0463 Durio zibethinus HOM05D004405 ORTHO05D005613 3.0e-67 259.2 244 58.2
Sopen04g032790 Solanum pennellii HOM05D004405 ORTHO05D005613 3.0e-67 259.2 241 56.4
Manes.18G032800 Manihot esculenta HOM05D004405 ORTHO05D005613 3.9e-67 258.8 238 58.4
PGSC0003DMG400008025 Solanum tuberosum HOM05D004405 ORTHO05D005613 6.6e-67 258.1 241 56.0
CSS0021517 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.5e-66 256.9 181 70.2
Rhsim06G0048000 Rhododendron simsii HOM05D000235 ORTHO05D000147 1.5e-66 256.9 175 71.4
Cfa018524 Carpinus fangiana HOM05D004405 ORTHO05D005613 2.5e-66 256.1 176 68.2
Gohir.A06G016900 Gossypium hirsutum HOM05D004405 ORTHO05D005613 3.3e-66 255.8 243 56.0
CiPaw.15G061900 Carya illinoinensis HOM05D004405 ORTHO05D005613 4.3e-66 255.4 242 55.8
CSS0015821 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 5.6e-66 255.0 178 70.8
GSVIVG01009527001 Vitis vinifera HOM05D004405 ORTHO05D005613 9.5e-66 254.2 213 61.5
Prupe.1G439200 Prunus persica HOM05D004405 ORTHO05D005613 1.2e-65 253.8 228 57.5
Gohir.D06G015000 Gossypium hirsutum HOM05D004405 ORTHO05D005613 1.6e-65 253.4 246 56.9
Gorai.010G017800 Gossypium raimondii HOM05D004405 ORTHO05D005613 2.1e-65 253.1 217 62.2
Sabra14G0022800 Salix brachista HOM05D004405 ORTHO05D005613 2.1e-65 253.1 233 58.4
Peaxi162Scf00528g00045 Petunia axillaris HOM05D004405 ORTHO05D005613 4.7e-65 251.9 181 68.0
TWI36G1713 Tripterygium wilfordii HOM05D004405 ORTHO05D005613 4.7e-65 251.9 183 67.8
Nitab4.5_0000686g0020 Nicotiana tabacum HOM05D004405 ORTHO05D005613 8.0e-65 251.1 215 60.5
CANSAT54G1019 Cannabis sativa HOM05D004405 ORTHO05D005613 1.4e-64 250.4 213 56.3
Nitab4.5_0001101g0090 Nicotiana tabacum HOM05D004405 ORTHO05D005613 1.8e-64 250.0 215 60.0
MD08G1103900 Malus domestica HOM05D004405 ORTHO05D005613 3.1e-64 249.2 228 56.6
MD15G1085100 Malus domestica HOM05D004405 ORTHO05D005613 4.0e-64 248.8 230 56.5
COL.COLO4_26473 Corchorus olitorius HOM05D004405 ORTHO05D005613 5.2e-64 248.4 245 57.1
CARHR037030 Cardamine hirsuta HOM05D004405 ORTHO05D005613 6.8e-64 248.1 214 59.8
CsaV3_2G028080 Cucumis sativus L. HOM05D004405 ORTHO05D005613 8.9e-64 247.7 215 59.1
TWI36G1445 Tripterygium wilfordii HOM05D004405 ORTHO05D005613 1.2e-63 247.3 180 67.2
CiPaw.16G046000 Carya illinoinensis HOM05D004405 ORTHO05D005613 2.6e-63 246.1 163 73.0
Potri.014G032400 Populus trichocarpa HOM05D004405 ORTHO05D005613 2.6e-63 246.1 214 58.9
PGR083G0008 Punica granatum HOM05D004405 ORTHO05D005613 2.6e-63 246.1 180 65.6
THA.LOC104813205 Tarenaya hassleriana HOM05D004405 ORTHO05D005613 2.6e-63 246.1 192 64.6
AT1G47420 Arabidopsis thaliana HOM05D004405 ORTHO05D005613 3.4e-63 245.7 183 66.1
Lalb_Chr14g0368801 Lupinus albus HOM05D004405 ORTHO05D005613 3.4e-63 245.7 235 54.5
Nitab4.5_0000453g0210 Nicotiana tabacum HOM05D004405 ORTHO05D005613 4.4e-63 245.4 236 55.5
MELO3C010886.2 Cucumis melo HOM05D004405 ORTHO05D005613 5.8e-63 245.0 176 67.0
A10p06390 Brassica napus HOM05D004405 ORTHO05D005613 9.8e-63 244.2 214 60.7
THA.LOC104806948 Tarenaya hassleriana HOM05D004405 ORTHO05D005613 1.3e-62 243.8 215 60.5
Cc10_g04350 Coffea canephora HOM05D004405 ORTHO05D005613 1.7e-62 243.4 181 66.3
Aa31sc924G10 Aethionema arabicum HOM05D004405 ORTHO05D005613 2.2e-62 243.0 221 59.7
BcaB04g17525 Brassica carinata HOM05D004405 ORTHO05D005613 4.9e-62 241.9 214 59.8
BraA08t32566Z Brassica rapa HOM05D004405 ORTHO05D005613 4.9e-62 241.9 214 59.8
Carub.0001s3623 Capsella rubella HOM05D004405 ORTHO05D005613 4.9e-62 241.9 214 59.8
Thhalv10011700m.g Eutrema salsugineum HOM05D004405 ORTHO05D005613 4.9e-62 241.9 214 59.8
Lalb_Chr24g0399241 Lupinus albus HOM05D004405 ORTHO05D005613 4.9e-62 241.9 216 56.5
PSO063G4876 Papaver somniferum HOM05D004405 ORTHO05D005613 4.9e-62 241.9 233 55.8
Sopen12g030800 Solanum pennellii HOM05D004405 ORTHO05D005613 4.9e-62 241.9 229 56.8
Zm00001eb053470 Zea mays HOM05D004405 ORTHO05D005613 4.9e-62 241.9 212 59.4
CAN.G1422.6 Capsicum annuum HOM05D004405 ORTHO05D005613 6.4e-62 241.5 183 65.0
Ciclev10002311m.g Citrus clementina HOM05D004405 ORTHO05D005613 6.4e-62 241.5 236 53.4
Os04g0418000 Oryza sativa ssp. japonica HOM05D004405 ORTHO05D005613 6.4e-62 241.5 173 69.4
Aa31sc213G20 Aethionema arabicum HOM05D004405 ORTHO05D005613 8.3e-62 241.1 178 66.3
Nn7g38185 Nelumbo nucifera HOM05D004405 ORTHO05D005613 8.3e-62 241.1 152 75.7
HPP92_014066 Vanilla planifolia HOM05D004405 ORTHO05D005613 8.3e-62 241.1 174 70.1
AL1G53710 Arabidopsis lyrata HOM05D004405 ORTHO05D005613 1.1e-61 240.7 176 67.0
A08p05640 Brassica napus HOM05D004405 ORTHO05D005613 1.1e-61 240.7 214 59.3
VMungo0647G1810 Vigna mungo HOM05D004405 ORTHO05D005613 1.1e-61 240.7 233 53.6
BcaC08g42948 Brassica carinata HOM05D004405 ORTHO05D005613 1.4e-61 240.4 183 65.0
C06p01920 Brassica napus HOM05D004405 ORTHO05D005613 1.4e-61 240.4 183 65.0
PSO782G1589 Papaver somniferum HOM05D004405 ORTHO05D005613 1.4e-61 240.4 233 54.5
Phvul.001G020600 Phaseolus vulgaris HOM05D004405 ORTHO05D005613 1.4e-61 240.4 226 54.0
Atru.chr7.31 Acer truncatum HOM05D004405 ORTHO05D005613 1.9e-61 240.0 205 61.0
BcaC07g37214 Brassica carinata HOM05D004405 ORTHO05D005613 2.4e-61 239.6 183 65.0
C08p06290 Brassica napus HOM05D004405 ORTHO05D005613 2.4e-61 239.6 183 65.0
BolC8t47475H Brassica oleracea HOM05D004405 ORTHO05D005613 2.4e-61 239.6 183 65.0
Glyma.17G243600 Glycine max HOM05D004405 ORTHO05D005613 2.4e-61 239.6 224 55.8
PGSC0003DMG400015445 Solanum tuberosum HOM05D004405 ORTHO05D005613 2.4e-61 239.6 229 56.3
Zm00001eb217160 Zea mays HOM05D004405 ORTHO05D005613 2.4e-61 239.6 192 64.6
FAN15G0428 Fragaria x ananassa HOM05D004405 ORTHO05D005613 4.1e-61 238.8 181 64.1
FAN20G0125 Fragaria x ananassa HOM05D004405 ORTHO05D005613 4.1e-61 238.8 181 64.1
FAN27G0612 Fragaria x ananassa HOM05D004405 ORTHO05D005613 5.4e-61 238.4 181 64.1
RcHm_v2.0_Chr6g0307421 Rosa chinensis HOM05D004405 ORTHO05D005613 5.4e-61 238.4 189 61.9
Solyc12g088900.2 Solanum lycopersicum HOM05D004405 ORTHO05D005613 5.4e-61 238.4 215 58.6
arahy.Tifrunner.gnm1.ann1.G214E9 Arachis hypogaea HOM05D004405 ORTHO05D005613 7.0e-61 238.0 181 64.1
arahy.Tifrunner.gnm1.ann1.P974E5 Arachis hypogaea HOM05D004405 ORTHO05D005613 7.0e-61 238.0 181 64.1
BcaB07g33838 Brassica carinata HOM05D004405 ORTHO05D005613 7.0e-61 238.0 203 60.1
Glyma.14G081700 Glycine max HOM05D004405 ORTHO05D005613 7.0e-61 238.0 228 55.7
Sp1g34510 Schrenkiella parvula HOM05D004405 ORTHO05D005613 7.0e-61 238.0 178 66.3
SpUn0102_0010 Schrenkiella parvula HOM05D004405 ORTHO05D005613 7.0e-61 238.0 178 66.3
FvH4_2g34650 Fragaria vesca HOM05D004405 ORTHO05D005613 1.2e-60 237.3 181 63.5
Migut.D01835 Erythranthe guttata HOM05D004405 ORTHO05D005613 2.1e-60 236.5 238 51.7
PGR031G1065 Punica granatum HOM05D004405 ORTHO05D005613 2.7e-60 236.1 215 58.6
SGA_v2.0_scaffold7G04073 Striga asiatica HOM05D004405 ORTHO05D005613 2.7e-60 236.1 184 63.0
ClCG08G015700 Citrullus lanatus HOM05D004405 ORTHO05D005613 3.5e-60 235.7 215 57.7
DCAR_015085 Daucus carota HOM05D004405 ORTHO05D005613 4.6e-60 235.3 182 65.4
MSTRG.9635 Avicennia marina HOM05D004405 ORTHO05D005613 6.0e-60 235.0 195 60.5
Peaxi162Scf00064g00017 Petunia axillaris HOM05D004405 ORTHO05D005613 6.0e-60 235.0 239 52.3
Ca_13303_v3 Cicer arietinum L. HOM05D004405 ORTHO05D005613 1.3e-59 233.8 213 55.4
TPR.G13673 Trifolium pratense HOM05D004405 ORTHO05D005613 2.3e-59 233.0 195 59.5
Medtr1g019810 Medicago truncatula HOM05D004405 ORTHO05D005613 3.9e-59 232.3 190 60.0
SGA_v2.0_scaffold114G31897 Striga asiatica HOM05D004405 ORTHO05D005613 3.9e-59 232.3 181 61.9
Lj5g0011335 Lotus japonicus HOM05D004405 ORTHO05D005613 6.6e-59 231.5 183 61.2
MSTRG.4418 Avicennia marina HOM05D004405 ORTHO05D005613 8.6e-59 231.1 214 56.5
ECA247G2210 Erigeron canadensis HOM05D004405 ORTHO05D005613 8.6e-59 231.1 178 64.0
HanXRQChr04g0103551 Helianthus annuus HOM05D004405 ORTHO05D005613 8.6e-59 231.1 178 64.6
Psat6g012760 Pisum sativum HOM05D004405 ORTHO05D005613 1.5e-58 230.3 203 57.1
Sed0012636 Sechium edule HOM05D004405 ORTHO05D005613 3.3e-58 229.2 215 56.3
vmacro05293 Vaccinium macrocarpon HOM05D004405 ORTHO05D005613 5.6e-58 228.4 209 56.5
SEGI_20825 Sequoiadendron giganteum HOM05D004405 ORTHO05D005613 7.3e-58 228.0 172 64.5
Ah.01g019210 Amaranthus hybridus HOM05D004405 ORTHO05D005613 1.2e-57 227.3 205 55.1
CAN.G371.36 Capsicum annuum HOM05D004405 ORTHO05D005613 1.6e-57 226.9 171 64.3
ECA233G0805 Erigeron canadensis HOM05D004405 ORTHO05D005613 2.1e-57 226.5 180 61.7
AUR62037877 Chenopodium quinoa HOM05D004405 ORTHO05D005613 3.6e-57 225.7 233 51.9
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 4.7e-57 225.3 200 58.5
SEGI_22288 Sequoiadendron giganteum HOM05D004405 ORTHO05D005613 4.7e-57 225.3 172 64.0
CSS0003579 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 6.2e-57 224.9 163 67.5
CSS0039327 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 3.1e-56 222.6 147 74.1
CDE01G0147 Ceratophyllum demersum HOM05D004405 ORTHO05D005613 6.8e-56 221.5 187 57.8
unitig_21.g20460 Utricularia gibba HOM05D004405 ORTHO05D005613 1.2e-55 220.7 230 51.7
EL10Ac7g16991 Beta vulgaris HOM05D004405 ORTHO05D005613 3.4e-55 219.2 187 59.4
Lsat_1_v5_gn_1_20160 Lactuca sativa HOM05D004405 ORTHO05D005613 7.5e-55 218.0 204 55.9
Sc15g0006290 Simmondsia chinensis HOM05D004405 ORTHO05D005613 3.2e-53 212.6 163 62.6
CSS0018141 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 2.1e-52 209.9 162 66.7
Nitab4.5_0004184g0030 Nicotiana tabacum HOM05D004405 ORTHO05D005613 2.7e-52 209.5 213 53.1
Aqoxy6G01363 Aquilegia oxysepala HOM05D004405 ORTHO05D005613 1.3e-51 207.2 197 53.3
Manes.05G171800 Manihot esculenta HOM05D004405 ORTHO05D005613 5.1e-51 205.3 198 56.1
SalBow7G1402 Salvia bowleyana HOM05D004405 ORTHO05D005613 1.5e-50 203.8 169 58.6
BolSC99t61278H Brassica oleracea HOM05D004405 ORTHO05D005613 2.5e-50 203.0 195 56.4
AUR62019554 Chenopodium quinoa HOM05D004405 ORTHO05D005613 4.0e-48 195.7 215 49.8
CSS0001980 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 2.9e-46 189.5 132 67.4
BolC6t35323H Brassica oleracea HOM05D004405 ORTHO05D005613 1.2e-44 184.1 163 58.3
Manes.05G171801 Manihot esculenta HOM05D004405 ORTHO05D005613 2.7e-44 183.0 194 53.1
CSS0025487 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 3.3e-42 176.0 147 63.3
Pp3c21_1560 Physcomitrium patens HOM05D004405 ORTHO05D005613 4.4e-39 165.6 230 42.6
FvH4_2g34710 Fragaria vesca HOM05D004405 ORTHO05D005613 3.2e-37 159.5 112 66.1
Mapoly0033s0094 Marchantia polymorpha HOM05D004405 ORTHO05D005613 2.0e-31 140.2 198 40.4
MD04G1229600 Malus domestica HOM05D004405 ORTHO05D005613 1.3e-30 137.5 110 57.3
AagrBONN_evm.TU.Sc2ySwM_344.3923 Anthoceros agrestis HOM05D004405 ORTHO05D005613 2.9e-30 136.3 234 36.8
SMO351G0505 Selaginella moellendorffii HOM05D004405 ORTHO05D005613 3.2e-29 132.9 171 42.7
SGA_v2.0_scaffold7G04074 Striga asiatica HOM05D004405 ORTHO05D005613 3.0e-27 126.3 149 47.0
CBR_g38490 Chara braunii HOM05D004405 ORTHO05D005613 2.0e-23 113.6 173 35.8
CSS0003400 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.9e-21 107.1 76 65.8
PRCOL_00004317 Prasinoderma coloniale HOM05D004405 ORTHO05D005613 2.5e-18 96.7 150 37.3
Lsat_1_v5_gn_2_117301 Lactuca sativa HOM05D004405 ORTHO05D005613 4.9e-14 82.4 86 48.8
Lsat_1_v5_gn_0_36860 Lactuca sativa HOM05D004405 ORTHO05D005613 2.3e-11 73.6 74 47.3
Actinidia22615 Actinidia chinensis HOM05D004405 ORTHO05D005613 9.0e-08 61.6 48 58.3


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