Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 0.0e+00 2036.9 1204 100.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.1e-112 412.5 912 39.1
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 9.2e-112 409.5 816 41.7
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 7.3e-109 399.8 903 37.0
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 2.2e-105 388.3 686 44.5
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 1.7e-102 378.6 847 39.6
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 4.7e-100 370.5 883 39.3
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 8.1e-100 369.8 1067 34.7
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 2.4e-99 368.2 935 36.7
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 4.2e-96 357.5 779 37.5
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.2e-95 355.9 779 37.5
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 5.1e-94 350.5 781 39.1
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.9e-93 348.6 771 36.8
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 1.3e-92 345.9 817 37.1
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.3e-92 345.9 575 44.5
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 4.9e-89 334.0 831 37.3
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 4.9e-89 334.0 762 38.3
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 8.4e-89 333.2 788 35.7
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 2.4e-88 331.6 758 38.1
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 7.1e-88 330.1 821 38.2
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 2.1e-87 328.6 927 35.5
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 2.1e-87 328.6 613 41.4
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 2.7e-87 328.2 800 36.6
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 3.5e-87 327.8 903 34.2
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 4.6e-87 327.4 889 38.0
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 7.9e-87 326.6 736 37.1
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 8.7e-86 323.2 920 37.6
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 2.5e-85 321.6 765 37.6
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 5.6e-85 320.5 764 36.5
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 5.3e-83 313.9 778 36.4
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 9.9e-82 309.7 782 37.1
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.3e-81 309.3 712 38.6
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 2.2e-81 308.5 774 35.4
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 4.2e-80 304.3 766 36.8
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 2.3e-78 298.5 788 33.9
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.1e-77 296.2 635 38.9
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 4.3e-77 294.3 907 34.4
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 5.6e-77 293.9 871 34.4
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 9.6e-77 293.1 772 35.9
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.1e-76 292.0 795 36.1
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 2.1e-76 292.0 780 35.6
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 6.2e-76 290.4 563 40.7
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 6.2e-76 290.4 766 35.1
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.4e-75 289.3 802 35.8
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 4.0e-75 287.7 680 36.9
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 4.0e-75 287.7 765 35.2
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 4.0e-75 287.7 640 38.1
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.5e-74 285.8 774 34.9
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 2.0e-74 285.4 763 35.6
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 4.5e-74 284.3 835 34.9
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 4.5e-74 284.3 571 39.8
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 5.8e-74 283.9 555 40.7
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 1.0e-73 283.1 415 46.0
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.7e-73 282.3 775 35.0
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 4.9e-73 280.8 688 37.2
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 4.9e-73 280.8 571 41.2
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 6.0e-71 273.9 782 33.5
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 5.1e-70 270.8 781 33.0
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 2.5e-69 268.5 687 37.4
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 5.7e-69 267.3 563 38.5
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 1.3e-68 266.2 731 36.4
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 2.8e-68 265.0 921 31.4
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 3.7e-68 264.6 797 34.0
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 3.7e-68 264.6 781 35.2
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 4.8e-68 264.2 914 32.2
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 6.3e-68 263.8 873 34.7
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 1.8e-67 262.3 740 34.6
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 5.3e-67 260.8 904 31.9
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 2.9e-65 255.0 706 34.0
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 4.6e-63 247.7 546 37.5
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 1.8e-62 245.7 753 34.5
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 3.9e-62 244.6 702 35.8
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 8.7e-62 243.4 739 34.4
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 1.5e-61 242.7 713 37.3
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 2.5e-61 241.9 756 32.7
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 4.3e-61 241.1 604 36.1
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 3.2e-56 224.9 649 33.4
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 1.6e-55 222.6 569 36.0
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 1.6e-55 222.6 505 37.2
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 7.9e-55 220.3 720 31.2
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 2.0e-53 215.7 793 31.7
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.5e-53 215.3 805 30.6
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 6.9e-51 207.2 677 32.3
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 6.1e-47 194.1 699 32.6
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 3.9e-46 191.4 774 29.6
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 7.4e-45 187.2 706 32.0
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 3.7e-44 184.9 836 29.5
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 1.0e-41 176.8 563 35.5
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 2.6e-37 162.2 808 28.7
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 1.7e-36 159.5 359 36.5
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 7.0e-35 154.1 475 33.1
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 2.9e-33 148.7 430 37.4
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 2.1e-31 142.5 892 27.2
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 1.0e-30 140.2 281 40.6
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 3.0e-30 138.7 629 31.0
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 2.6e-29 135.6 765 29.0
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 5.7e-29 134.4 329 37.7
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 9.1e-27 127.1 189 48.7
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 1.2e-26 126.7 577 29.6
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 1.0e-25 123.6 749 26.8
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 5.0e-25 121.3 848 25.9
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 1.5e-24 119.8 310 38.1
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 3.2e-24 118.6 487 30.8
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 3.2e-24 118.6 487 30.8
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 6.1e-23 114.4 254 36.6
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 8.3e-20 104.0 752 25.0
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 7.3e-16 90.9 398 30.2
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 2.8e-15 89.0 139 41.0
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 1.0e-14 87.0 276 32.2
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 6.4e-12 77.8 125 40.0
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 6.4e-12 77.8 136 44.9
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 8.0e-07 60.8 102 45.1


User provided reference genes

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