Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G096 Amborella trichopoda HOM05D001106 ORTHO05D000910 7.7e-124 447.2 232 100.0
TAR622G0145 Trochodendron aralioides HOM05D001106 ORTHO05D000910 6.7e-19 98.6 198 41.9
DCAR_011276 Daucus carota HOM05D001106 ORTHO05D000910 6.3e-17 92.0 187 40.1
PGSC0003DMG400012618 Solanum tuberosum HOM05D001106 ORTHO05D000910 2.0e-15 87.0 230 34.3
Oeu054650.1 Olea europaea HOM05D001106 ORTHO05D000910 4.5e-15 85.9 215 34.9
Actinidia36145 Actinidia chinensis HOM05D001106 ORTHO05D000910 5.9e-15 85.5 202 37.1
Manes.15G154300 Manihot esculenta HOM05D001106 ORTHO05D000910 1.7e-14 84.0 211 36.0
GSVIVG01003983001 Vitis vinifera HOM05D001106 ORTHO05D000910 1.7e-14 84.0 201 37.8
Actinidia05958 Actinidia chinensis HOM05D001106 ORTHO05D000910 2.9e-14 83.2 194 37.1
Oeu038068.1 Olea europaea HOM05D001106 ORTHO05D000910 8.5e-14 81.6 222 33.8
Potri.001G339200 Populus trichocarpa HOM05D001106 ORTHO05D000910 8.5e-14 81.6 209 35.4
Sopen02g038060 Solanum pennellii HOM05D001106 ORTHO05D000910 1.1e-13 81.3 214 33.2
QL02p073497 Quercus lobata HOM05D001106 ORTHO05D000910 1.4e-13 80.9 245 35.5
Solyc02g093590.3 Solanum lycopersicum HOM05D001106 ORTHO05D000910 1.4e-13 80.9 214 33.6
Nitab4.5_0000935g0190 Nicotiana tabacum HOM05D001106 ORTHO05D000910 2.5e-13 80.1 217 34.6
FAN14G4037 Fragaria x ananassa HOM05D001106 ORTHO05D000910 4.2e-13 79.3 177 36.2
Rhsim10G0013100 Rhododendron simsii HOM05D001106 ORTHO05D000910 4.2e-13 79.3 204 34.3
MBI08_g04807_MAGBIO Magnolia biondii HOM05D001106 ORTHO05D000910 7.2e-13 78.6 178 38.2
Peaxi162Scf00420g00155 Petunia axillaris HOM05D001106 ORTHO05D000910 7.2e-13 78.6 202 36.6
RhsimUnG0005000 Rhododendron simsii HOM05D001106 ORTHO05D000910 7.2e-13 78.6 206 34.0
Duzib147G1069 Durio zibethinus HOM05D001106 ORTHO05D000910 1.2e-12 77.8 232 31.5
FAN02G3931 Fragaria x ananassa HOM05D001106 ORTHO05D000910 1.2e-12 77.8 180 33.9
FAN09G1933 Fragaria x ananassa HOM05D001106 ORTHO05D000910 1.6e-12 77.4 167 34.7
TAR371G1296 Trochodendron aralioides HOM05D001106 ORTHO05D000910 2.1e-12 77.0 188 35.6
Dinv25710 Davidia involucrata HOM05D001106 ORTHO05D000910 2.7e-12 76.6 201 36.8
CsaV3_5G026860 Cucumis sativus L. HOM05D001106 ORTHO05D000910 4.7e-12 75.9 214 33.6
Prupe.3G296700 Prunus persica HOM05D001106 ORTHO05D000910 7.9e-12 75.1 210 34.8
Sed0008506 Sechium edule HOM05D001106 ORTHO05D000910 1.0e-11 74.7 224 31.7
Gohir.A09G031400 Gossypium hirsutum HOM05D001106 ORTHO05D000910 1.4e-11 74.3 243 29.2
SalBow7G4716 Salvia bowleyana HOM05D001106 ORTHO05D000910 1.4e-11 74.3 199 36.2
FvH4_6g52200 Fragaria vesca HOM05D001106 ORTHO05D000910 1.8e-11 73.9 168 36.9
MD17G1020400 Malus domestica HOM05D001106 ORTHO05D000910 1.8e-11 73.9 235 32.8
MELO3C021608.2 Cucumis melo HOM05D001106 ORTHO05D000910 3.9e-11 72.8 214 33.6
Nitab4.5_0001031g0320 Nicotiana tabacum HOM05D001106 ORTHO05D000910 3.9e-11 72.8 170 37.1
Hma1.2p1_0279F.1_g112020 Hydrangea macrophylla HOM05D001106 ORTHO05D000910 6.7e-11 72.0 195 35.4
Phvul.008G147400 Phaseolus vulgaris HOM05D001106 ORTHO05D000910 6.7e-11 72.0 208 34.6
FAN14G1087 Fragaria x ananassa HOM05D001106 ORTHO05D000910 8.8e-11 71.6 168 36.3
CiPaw.03G048100 Carya illinoinensis HOM05D001106 ORTHO05D000910 1.5e-10 70.9 234 35.0
Gohir.D09G031500 Gossypium hirsutum HOM05D001106 ORTHO05D000910 1.5e-10 70.9 243 29.6
Cpa.g.sc862.1 Carica papaya HOM05D001106 ORTHO05D000910 2.6e-10 70.1 227 31.3
ClCG09G019520 Citrullus lanatus HOM05D001106 ORTHO05D000910 2.6e-10 70.1 226 32.7
FAN05G0553 Fragaria x ananassa HOM05D001106 ORTHO05D000910 2.6e-10 70.1 172 34.9
Hund13018 Selenicereus undatus HOM05D001106 ORTHO05D000910 3.3e-10 69.7 211 34.1
Cfa007305 Carpinus fangiana HOM05D001106 ORTHO05D000910 4.4e-10 69.3 225 33.3
Haze_14788 Corylus avellana HOM05D001106 ORTHO05D000910 4.4e-10 69.3 225 33.8
Gorai.006G036400 Gossypium raimondii HOM05D001106 ORTHO05D000910 5.7e-10 68.9 244 29.5
MD09G1019800 Malus domestica HOM05D001106 ORTHO05D000910 5.7e-10 68.9 239 33.1
CiPaw.04G031600 Carya illinoinensis HOM05D001106 ORTHO05D000910 1.3e-09 67.8 181 34.8
Ca_13833_v3 Cicer arietinum L. HOM05D001106 ORTHO05D000910 3.7e-09 66.2 160 36.9
Duzib187G1470 Durio zibethinus HOM05D001106 ORTHO05D000910 3.7e-09 66.2 214 30.4
HanXRQChr17g0549411 Helianthus annuus HOM05D001106 ORTHO05D000910 6.3e-09 65.5 206 29.1
VMungo1383G1671 Vigna mungo HOM05D001106 ORTHO05D000910 8.2e-09 65.1 211 32.2
Lalb_Chr14g0362941 Lupinus albus HOM05D001106 ORTHO05D000910 1.4e-08 64.3 214 32.2
vmacro05900 Vaccinium macrocarpon HOM05D001106 ORTHO05D000910 3.1e-08 63.2 128 36.7
SGA_v2.0_scaffold47G17530 Striga asiatica HOM05D001106 ORTHO05D000910 4.1e-08 62.8 204 34.8
A03p06580 Brassica napus HOM05D001106 ORTHO05D000910 1.2e-07 61.2 72 47.2
BraA03t09990Z Brassica rapa HOM05D001106 ORTHO05D000910 1.2e-07 61.2 72 47.2
Sp6g29650 Schrenkiella parvula HOM05D001106 ORTHO05D000910 1.2e-07 61.2 213 30.0
CAN.G473.39 Capsicum annuum HOM05D001106 ORTHO05D000910 1.5e-07 60.8 103 39.8
BcaB08g36992 Brassica carinata HOM05D001106 ORTHO05D000910 2.6e-07 60.1 144 33.3
Ciclev10015864m.g Citrus clementina HOM05D001106 ORTHO05D000910 2.6e-07 60.1 229 29.7
Thecc.04G023900 Theobroma cacao HOM05D001106 ORTHO05D000910 2.6e-07 60.1 189 29.1
Cc07_g00200 Coffea canephora HOM05D001106 ORTHO05D000910 3.4e-07 59.7 213 29.1
SMO364G0443 Selaginella moellendorffii HOM05D001106 ORTHO05D000910 3.4e-07 59.7 96 36.5
CANSAT64G1585 Cannabis sativa HOM05D001106 ORTHO05D000910 4.5e-07 59.3 272 27.2
Hund20692 Selenicereus undatus HOM05D001106 ORTHO05D000910 4.5e-07 59.3 203 32.0
Aa31LG11G15160 Aethionema arabicum HOM05D001106 ORTHO05D000910 5.9e-07 58.9 85 42.4
Glyma.16G067000 Glycine max HOM05D001106 ORTHO05D000910 5.9e-07 58.9 223 31.4
Atru.chr6.2463 Acer truncatum HOM05D001106 ORTHO05D000910 7.7e-07 58.5 41 61.0
BcaB01g05115 Brassica carinata HOM05D001106 ORTHO05D000910 1.0e-06 58.2 187 28.9
A02p02460 Brassica napus HOM05D001106 ORTHO05D000910 1.0e-06 58.2 208 27.4
C02p06720 Brassica napus HOM05D001106 ORTHO05D000910 1.0e-06 58.2 210 28.1
C03p07600 Brassica napus HOM05D001106 ORTHO05D000910 1.0e-06 58.2 187 28.9
BolC3t13261H Brassica oleracea HOM05D001106 ORTHO05D000910 1.0e-06 58.2 187 28.9
BraA02t05216Z Brassica rapa HOM05D001106 ORTHO05D000910 1.0e-06 58.2 208 26.9
BcaC04g19037 Brassica carinata HOM05D001106 ORTHO05D000910 1.3e-06 57.8 33 69.7
A10p24150 Brassica napus HOM05D001106 ORTHO05D000910 1.3e-06 57.8 33 69.7
C09p62790 Brassica napus HOM05D001106 ORTHO05D000910 1.3e-06 57.8 33 69.7
BolC9t59116H Brassica oleracea HOM05D001106 ORTHO05D000910 1.3e-06 57.8 33 69.7
BraA10t44479Z Brassica rapa HOM05D001106 ORTHO05D000910 1.3e-06 57.8 33 69.7
CARHR198950 Cardamine hirsuta HOM05D001106 ORTHO05D000910 1.3e-06 57.8 113 35.4
AT5G14370 Arabidopsis thaliana HOM05D001106 ORTHO05D000910 1.7e-06 57.4 31 74.2
Carub.0006s1255 Capsella rubella HOM05D001106 ORTHO05D000910 1.7e-06 57.4 31 74.2
Thhalv10014044m.g Eutrema salsugineum HOM05D001106 ORTHO05D000910 1.7e-06 57.4 31 74.2
Nn4g22505 Nelumbo nucifera HOM05D001106 ORTHO05D000910 2.2e-06 57.0 232 28.4
Medtr7g032240 Medicago truncatula HOM05D001106 ORTHO05D000910 3.8e-06 56.2 82 43.9
BcaB01g06329 Brassica carinata HOM05D001106 ORTHO05D000910 5.0e-06 55.8 74 39.2
BcaNung03162 Brassica carinata HOM05D001106 ORTHO05D000910 5.0e-06 55.8 215 28.4
Oeu050450.1 Olea europaea HOM05D001106 ORTHO05D000910 5.0e-06 55.8 57 52.6
RcHm_v2.0_Chr2g0173701 Rosa chinensis HOM05D001106 ORTHO05D000910 5.0e-06 55.8 92 39.1
BcaB01g06376 Brassica carinata HOM05D001106 ORTHO05D000910 6.5e-06 55.5 36 61.1
BcaC03g13495 Brassica carinata HOM05D001106 ORTHO05D000910 6.5e-06 55.5 208 26.4
BolC2t06616H Brassica oleracea HOM05D001106 ORTHO05D000910 6.5e-06 55.5 208 26.4
AL6G25080 Arabidopsis lyrata HOM05D001106 ORTHO05D000910 8.5e-06 55.1 31 71.0
arahy.Tifrunner.gnm1.ann1.857KFG Arachis hypogaea HOM05D001106 ORTHO05D000910 8.5e-06 55.1 179 29.6


User provided reference genes

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