Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 3.3e-170 601.7 310 100.0
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.0e-79 300.1 273 57.9
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.5e-77 293.9 284 54.9
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 4.2e-77 292.4 262 59.2
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.8e-75 287.0 271 56.8
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 6.7e-75 285.0 205 67.8
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.2e-74 284.3 193 69.9
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.5e-74 283.9 265 57.0
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 3.3e-74 282.7 279 54.5
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.3e-73 280.8 223 62.3
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 2.0e-71 273.5 309 48.2
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 2.7e-71 273.1 257 56.4
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.5e-71 272.7 260 56.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.0e-70 271.2 194 66.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.0e-70 271.2 219 61.6
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.3e-70 270.8 223 58.3
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.3e-70 270.8 257 56.0
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.7e-70 270.4 198 65.7
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.7e-70 270.4 221 62.0
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 2.9e-70 269.6 275 53.8
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 3.8e-70 269.2 202 64.4
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 5.0e-70 268.9 265 55.1
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 5.0e-70 268.9 274 54.0
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 8.5e-70 268.1 201 64.7
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 1.1e-69 267.7 191 69.1
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.2e-69 265.8 255 55.3
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 9.4e-69 264.6 265 54.0
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.2e-68 264.2 196 65.3
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 1.6e-68 263.8 261 53.3
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 1.6e-68 263.8 217 60.4
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 2.1e-68 263.5 191 66.5
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.7e-68 263.1 273 52.0
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 4.7e-68 262.3 270 53.3
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 6.1e-68 261.9 264 54.5
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 8.0e-68 261.5 270 53.7
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.0e-67 261.2 268 51.9
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.8e-67 260.4 261 52.5
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.8e-67 260.4 270 53.3
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.8e-67 260.4 297 47.5
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 2.3e-67 260.0 255 52.2
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 3.0e-67 259.6 192 65.1
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 4.0e-67 259.2 271 50.9
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 5.2e-67 258.8 260 51.9
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.5e-66 257.3 303 48.2
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.0e-66 256.9 265 52.8
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 2.0e-66 256.9 255 51.8
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.6e-66 256.5 295 48.5
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 3.4e-66 256.1 271 51.7
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 7.5e-66 255.0 271 54.2
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 9.8e-66 254.6 271 50.2
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.3e-65 254.2 193 64.2
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.3e-65 254.2 212 57.1
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 1.7e-65 253.8 289 47.8
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 2.2e-65 253.4 272 49.6
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 2.2e-65 253.4 276 49.6
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 2.8e-65 253.1 192 61.5
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 2.8e-65 253.1 192 61.5
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.8e-65 253.1 236 55.9
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 3.7e-65 252.7 271 52.4
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 6.3e-65 251.9 235 56.2
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.1e-64 251.1 259 50.6
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.4e-64 250.8 259 50.6
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.4e-64 250.8 267 50.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 1.4e-64 250.8 304 47.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.8e-64 250.4 273 49.1
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.8e-64 250.4 273 49.1
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.8e-64 250.4 271 49.8
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.8e-64 250.4 268 50.4
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.0e-63 246.9 277 50.9
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.7e-62 243.8 202 60.9
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.3e-62 243.4 202 60.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.1e-60 236.9 262 50.4
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 7.5e-58 228.4 245 51.8
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.8e-57 226.5 256 50.0
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.8e-56 223.8 271 46.9
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 7.0e-56 221.9 265 47.5
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 2.0e-55 220.3 224 54.9
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 4.5e-55 219.2 262 48.9
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 7.8e-55 218.4 231 52.4
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.0e-51 208.0 375 37.1
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 1.0e-51 208.0 229 51.1
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.0e-51 208.0 227 49.3
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 3.2e-48 196.4 260 41.2
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 3.2e-48 196.4 157 61.1
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 3.2e-48 196.4 141 66.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 9.2e-48 194.9 282 44.3
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 4.6e-47 192.6 205 43.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.1e-45 188.0 262 40.5
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.8e-43 180.6 267 42.7
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 5.0e-38 162.5 202 43.1
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 9.9e-34 148.3 94 70.2
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.7e-30 137.5 153 51.0
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.2e-28 131.3 139 52.5
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 4.7e-28 129.4 168 44.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 4.4e-26 122.9 121 51.2
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.3e-25 121.3 160 41.2
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 2.7e-23 113.6 206 32.0
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 2.3e-22 110.5 130 39.2
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 2.3e-22 110.5 119 52.9
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.4e-19 100.5 117 41.9
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 9.0e-19 98.6 192 34.9
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 5.8e-18 95.9 90 53.3
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.3e-17 94.7 138 44.2
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 7.1e-16 89.0 62 67.7


User provided reference genes

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