Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 1.8e-90 335.9 170 100.0
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 8.1e-30 134.4 110 55.5
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 2.3e-29 132.9 107 59.8
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 2.3e-29 132.9 110 53.6
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 3.1e-29 132.5 107 59.8
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 2.6e-28 129.4 109 55.0
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 5.8e-28 128.3 110 52.7
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 5.8e-28 128.3 110 51.8
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 9.9e-28 127.5 132 44.7
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 9.9e-28 127.5 109 52.3
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.3e-27 127.1 110 52.7
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 1.7e-27 126.7 110 53.6
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 2.2e-27 126.3 110 51.8
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 2.9e-27 125.9 115 50.4
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 4.9e-27 125.2 110 50.9
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 8.4e-27 124.4 110 50.9
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 1.1e-26 124.0 110 52.7
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 1.1e-26 124.0 110 52.7
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 1.4e-26 123.6 110 51.8
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 1.4e-26 123.6 110 50.9
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 1.4e-26 123.6 110 50.9
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 1.9e-26 123.2 110 50.0
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 3.2e-26 122.5 110 51.8
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 9.2e-26 120.9 110 50.9
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 1.2e-25 120.6 110 50.9
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 1.2e-25 120.6 110 50.9
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 1.2e-25 120.6 110 50.9
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 1.2e-25 120.6 110 50.9
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 1.2e-25 120.6 110 50.9
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 1.6e-25 120.2 110 50.0
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 1.6e-25 120.2 109 51.4
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 1.6e-25 120.2 110 51.8
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 2.1e-25 119.8 107 50.5
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 3.5e-25 119.0 110 51.8
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 4.6e-25 118.6 110 48.2
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 6.0e-25 118.2 110 50.9
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 6.0e-25 118.2 93 58.1
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 7.8e-25 117.9 110 50.9
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 1.0e-24 117.5 110 50.0
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 1.0e-24 117.5 105 49.5
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 1.3e-24 117.1 110 50.0
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 1.3e-24 117.1 111 49.5
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 3.9e-24 115.5 110 49.1
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 3.9e-24 115.5 109 50.5
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 5.1e-24 115.2 111 49.5
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 6.6e-24 114.8 110 50.0
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 1.5e-23 113.6 110 47.3
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 1.5e-23 113.6 110 46.4
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 1.5e-23 113.6 109 48.6
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 3.3e-23 112.5 109 47.7
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 4.3e-23 112.1 109 48.6
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 4.3e-23 112.1 110 48.2
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 4.3e-23 112.1 110 44.5
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 4.3e-23 112.1 109 48.6
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 5.6e-23 111.7 109 47.7
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 7.3e-23 111.3 110 48.2
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 9.6e-23 110.9 110 44.5
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.2e-22 110.5 95 53.7
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 2.8e-22 109.4 110 46.4
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 2.8e-22 109.4 110 47.3
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 3.6e-22 109.0 93 54.8
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 3.6e-22 109.0 110 46.4
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 4.7e-22 108.6 110 46.4
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 6.2e-22 108.2 110 45.5
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 6.2e-22 108.2 110 45.5
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 8.1e-22 107.8 117 41.0
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 1.1e-21 107.5 111 44.1
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 1.1e-21 107.5 110 44.5
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 1.2e-20 104.0 110 45.5
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.5e-20 103.6 112 49.1
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 2.0e-20 103.2 103 47.6
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 7.6e-20 101.3 110 44.5
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 1.7e-19 100.1 84 53.6
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 1.7e-19 100.1 98 44.9
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 2.9e-19 99.4 110 43.6
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 3.8e-19 99.0 112 46.4
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.9e-18 96.7 112 46.4
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 1.9e-18 96.7 114 42.1
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 7.8e-17 91.3 113 39.8
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 7.8e-17 91.3 113 41.6
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 1.0e-16 90.9 103 41.7
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 2.3e-16 89.7 109 40.4
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 1.3e-14 84.0 83 47.0
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 1.8e-13 80.1 95 43.2
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 3.1e-13 79.3 84 46.4
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 1.2e-12 77.4 77 45.5
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 1.1e-10 70.9 84 42.9
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 1.6e-09 67.0 83 39.8
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 7.9e-09 64.7 109 37.6
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 2.3e-08 63.2 109 36.7
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 1.9e-07 60.1 53 43.4
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 5.6e-07 58.5 113 32.7
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 1.6e-06 57.0 52 50.0


User provided reference genes

Program Settings