Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.4e-84 315.5 160 100.0
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.2e-54 216.9 131 78.6
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 5.8e-54 214.5 137 76.6
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 7.5e-54 214.2 135 77.0
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 1.7e-53 213.0 146 71.2
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.2e-53 212.6 161 68.3
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.7e-53 211.8 148 70.9
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 3.7e-53 211.8 160 68.1
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 6.4e-53 211.1 147 72.1
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 6.4e-53 211.1 164 68.9
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 8.3e-53 210.7 122 79.5
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.1e-52 210.3 138 73.9
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.1e-52 210.3 166 66.9
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.4e-52 209.9 162 69.1
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.4e-52 209.9 161 68.9
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 1.4e-52 209.9 163 68.7
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.1e-52 208.4 164 67.1
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 4.1e-52 208.4 166 66.9
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 7.1e-52 207.6 137 75.2
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 7.1e-52 207.6 163 69.3
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 9.2e-52 207.2 161 67.7
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.2e-51 206.8 150 68.0
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.2e-51 206.8 137 72.3
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.2e-51 206.8 134 71.6
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.6e-51 206.5 161 67.7
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 2.1e-51 206.1 161 68.9
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 2.7e-51 205.7 128 75.0
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 3.5e-51 205.3 160 66.9
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.5e-51 205.3 161 67.1
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.5e-51 205.3 161 67.1
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 4.6e-51 204.9 147 70.7
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 4.6e-51 204.9 128 75.8
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 1.0e-50 203.8 142 67.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.0e-50 203.8 160 65.0
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 1.3e-50 203.4 162 66.7
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.3e-50 203.4 145 70.3
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.7e-50 203.0 134 70.9
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.3e-50 202.6 145 70.3
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.3e-50 202.6 129 73.6
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 3.0e-50 202.2 132 74.2
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.0e-50 202.2 129 73.6
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.0e-50 202.2 129 73.6
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.9e-50 201.8 160 66.2
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 5.1e-50 201.4 146 66.4
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 5.1e-50 201.4 121 78.5
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 5.1e-50 201.4 121 78.5
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 8.6e-50 200.7 144 68.1
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 8.6e-50 200.7 154 67.5
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.1e-49 200.3 165 66.1
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.1e-49 200.3 165 66.1
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.1e-49 200.3 121 78.5
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.5e-49 199.9 133 72.9
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 1.5e-49 199.9 133 72.9
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.5e-49 199.9 160 65.0
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.5e-49 199.9 154 66.9
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 2.5e-49 199.1 159 64.2
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 3.3e-49 198.7 135 69.6
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 3.3e-49 198.7 147 69.4
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 4.3e-49 198.4 138 71.0
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 4.3e-49 198.4 138 71.0
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 4.3e-49 198.4 161 63.4
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 5.6e-49 198.0 150 69.3
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 7.3e-49 197.6 135 68.9
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 9.5e-49 197.2 122 75.4
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 2.1e-48 196.1 122 75.4
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 2.8e-48 195.7 149 64.4
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 2.8e-48 195.7 168 64.3
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 2.8e-48 195.7 122 74.6
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 2.8e-48 195.7 128 71.9
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 3.6e-48 195.3 147 66.7
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 3.6e-48 195.3 157 63.7
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 4.7e-48 194.9 151 66.2
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 4.7e-48 194.9 157 65.0
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 4.7e-48 194.9 151 66.2
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 4.7e-48 194.9 148 65.5
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 6.2e-48 194.5 151 66.2
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 1.1e-47 193.7 159 64.8
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.4e-47 193.4 146 64.4
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.4e-47 193.4 153 66.0
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.8e-47 193.0 157 65.0
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.8e-47 193.0 157 65.0
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.8e-47 193.0 157 66.2
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.8e-47 193.0 157 66.2
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 3.1e-47 192.2 147 64.6
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.1e-47 192.2 151 63.6
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 5.2e-47 191.4 134 68.7
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 5.2e-47 191.4 148 65.5
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 8.9e-47 190.7 160 62.5
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 8.9e-47 190.7 155 63.9
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 8.9e-47 190.7 125 73.6
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 8.9e-47 190.7 158 63.3
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 1.2e-46 190.3 132 68.2
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.5e-46 189.9 157 63.1
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 2.0e-46 189.5 158 62.0
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 2.0e-46 189.5 160 61.2
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 5.8e-46 188.0 159 62.3
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 4.9e-45 184.9 140 62.9
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 4.9e-45 184.9 138 66.7
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 4.9e-45 184.9 166 59.0
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 6.4e-45 184.5 124 68.5
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 1.4e-44 183.3 118 67.8
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.6e-43 179.9 147 62.6
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 2.7e-43 179.1 128 66.4
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 1.7e-42 176.4 118 65.3
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 2.1e-40 169.5 119 67.2
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 8.1e-40 167.5 152 59.9
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 8.1e-40 167.5 124 66.1
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.8e-39 166.4 130 63.8
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 4.2e-36 155.2 109 67.0
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.2e-35 153.7 139 54.7
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.0e-35 151.4 91 74.7
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 1.5e-33 146.7 153 51.0
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.0e-26 124.0 76 77.6
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 1.3e-26 123.6 77 67.5
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.8e-26 123.2 81 74.1
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.9e-25 119.8 145 46.9
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 1.7e-21 106.7 90 61.1
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 2.2e-21 106.3 90 60.0
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.0e-18 97.4 73 69.9
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 1.5e-14 83.6 138 44.9
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 4.5e-14 82.0 121 38.0
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 5.8e-14 81.6 153 35.3
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 5.1e-10 68.6 131 33.6
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.1e-09 67.4 48 62.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 2.5e-09 66.2 48 64.6


User provided reference genes

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