Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 7.4e-158 560.8 358 100.0
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 6.0e-67 258.8 353 59.2
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 5.1e-66 255.8 355 54.9
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 1.5e-65 254.2 371 49.3
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.3e-65 253.1 357 53.2
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 9.5e-65 251.5 366 52.5
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.6e-64 250.8 371 51.8
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 1.8e-63 247.3 362 48.9
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 2.4e-63 246.9 366 52.7
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.1e-63 246.5 362 47.5
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 3.8e-61 239.6 356 53.1
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.1e-60 238.0 356 53.1
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 1.4e-60 237.7 356 48.9
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.4e-60 237.7 355 53.8
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 1.9e-60 237.3 362 48.9
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 1.6e-59 234.2 358 46.6
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.6e-59 234.2 359 47.9
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 4.6e-59 232.6 355 46.5
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 1.0e-58 231.5 355 51.3
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.7e-58 230.7 355 45.1
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 2.3e-58 230.3 356 50.3
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 2.3e-58 230.3 365 57.3
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 3.0e-58 229.9 371 49.3
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 5.1e-58 229.2 356 48.3
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 8.7e-58 228.4 360 47.2
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 8.7e-58 228.4 359 47.4
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.9e-57 227.3 357 52.4
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 5.6e-57 225.7 364 51.9
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 7.3e-57 225.3 373 46.9
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 7.3e-57 225.3 376 49.7
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 4.7e-56 222.6 355 45.4
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 8.1e-56 221.9 367 51.5
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.1e-56 221.9 362 44.8
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.1e-55 221.5 357 52.9
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 2.4e-55 220.3 358 47.8
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 3.1e-55 219.9 357 56.3
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 5.2e-55 219.2 373 53.6
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 6.9e-55 218.8 358 45.5
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 9.0e-55 218.4 377 43.0
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.5e-54 217.6 357 51.3
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 2.6e-54 216.9 359 49.9
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.4e-54 216.5 355 53.2
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 7.6e-54 215.3 358 51.1
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 7.6e-54 215.3 357 47.9
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 7.6e-54 215.3 355 52.7
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 9.9e-54 214.9 362 51.1
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 9.9e-54 214.9 356 49.7
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.3e-53 214.5 355 54.1
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.7e-53 214.2 355 51.8
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 2.2e-53 213.8 357 45.7
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 2.9e-53 213.4 372 42.5
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 6.4e-53 212.2 356 46.9
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 8.4e-53 211.8 372 51.3
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 8.4e-53 211.8 398 43.0
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.1e-52 211.5 356 48.9
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 1.1e-52 211.5 361 50.4
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.1e-52 211.5 356 51.1
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.4e-52 211.1 367 45.0
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.4e-52 211.1 360 46.1
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.9e-52 210.7 355 49.6
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 2.4e-52 210.3 357 45.7
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 4.2e-52 209.5 366 46.7
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 7.1e-52 208.8 372 44.6
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 7.1e-52 208.8 355 52.1
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 9.3e-52 208.4 353 46.2
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.6e-51 207.6 356 48.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 3.5e-51 206.5 354 47.2
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 7.8e-51 205.3 357 51.5
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 1.0e-50 204.9 354 44.6
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 1.0e-50 204.9 354 46.9
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.0e-50 204.9 358 51.7
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 1.3e-50 204.5 355 47.0
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 3.9e-50 203.0 355 55.2
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.9e-50 203.0 356 50.3
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 3.9e-50 203.0 357 52.4
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 6.6e-50 202.2 354 46.0
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.1e-49 201.4 357 44.5
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 1.9e-49 200.7 352 44.3
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 3.3e-49 199.9 369 48.8
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 5.6e-49 199.1 354 48.3
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 9.6e-49 198.4 373 52.3
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.6e-48 197.6 356 45.8
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.6e-48 197.6 367 50.7
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 2.8e-48 196.8 371 45.8
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.8e-48 196.1 358 50.8
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 8.1e-48 195.3 359 52.1
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 3.1e-47 193.4 355 52.4
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 5.3e-47 192.6 354 45.8
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.5e-46 191.0 355 42.0
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.5e-46 191.0 360 50.8
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.5e-46 191.0 351 46.2
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.6e-46 190.3 361 52.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 9.9e-46 188.3 179 62.0
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 9.9e-46 188.3 355 47.3
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 9.9e-46 188.3 360 47.2
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 2.2e-45 187.2 356 52.8
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 3.8e-45 186.4 358 50.3
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 4.9e-45 186.0 360 50.3
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.2e-44 183.0 355 50.4
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 2.1e-43 180.6 355 49.9
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.7e-43 180.3 356 52.5
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.8e-42 177.6 355 52.4
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 2.3e-42 177.2 355 53.2
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 4.3e-41 172.9 393 45.8
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 4.8e-40 169.5 355 52.1
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.4e-39 167.9 355 52.1
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.8e-39 167.5 359 47.6
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.2e-38 164.9 172 57.6
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 4.5e-38 162.9 383 36.6
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 2.9e-37 160.2 359 37.3
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 9.3e-36 155.2 306 46.7
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 7.4e-33 145.6 385 37.1
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 6.9e-31 139.0 383 36.0
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 6.9e-31 139.0 383 36.0
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 1.2e-30 138.3 142 58.5
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.9e-29 133.7 355 36.9
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.9e-28 131.0 305 36.1
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.5e-27 126.7 131 55.0
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 8.7e-26 122.1 106 62.3
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.3e-25 120.2 114 62.3
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.7e-25 118.6 279 36.9
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 6.3e-24 115.9 107 60.7
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-23 115.2 107 60.7
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-23 114.8 366 33.6
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 9.0e-23 112.1 212 40.1
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-22 111.3 102 60.8
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-22 111.3 323 33.1
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.9e-21 107.1 159 45.3
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 5.5e-20 102.8 273 39.9
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-17 94.4 191 37.2
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-15 88.6 273 32.6
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-15 88.2 82 58.5
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 3.1e-15 87.0 308 38.0
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.1e-15 85.5 303 35.6
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-13 82.0 164 39.6
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-13 80.5 80 51.2
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 2.7e-11 73.9 51 78.4
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 6.7e-10 69.3 225 42.2
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.7e-10 69.3 355 27.3
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 4.8e-08 63.2 55 56.4
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.4e-07 61.6 95 43.2
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-07 60.1 294 27.6
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 1.2e-06 58.5 71 47.9
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.6e-06 57.4 134 36.6


User provided reference genes

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