Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 3.2e-130 468.4 229 100.0
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.9e-58 229.9 139 74.8
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 4.2e-58 228.8 144 71.5
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.0e-56 224.2 139 72.7
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 5.2e-56 221.9 144 69.4
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 1.2e-55 220.7 139 71.9
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.5e-55 220.3 139 72.7
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 5.7e-55 218.4 139 70.5
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 1.7e-54 216.9 144 69.4
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 3.7e-54 215.7 144 69.4
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 6.3e-54 214.9 139 69.8
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 6.3e-54 214.9 139 69.8
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.1e-53 214.2 139 70.5
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.1e-53 214.2 140 68.6
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 1.8e-53 213.4 144 70.1
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.8e-53 213.4 140 72.9
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 3.1e-53 212.6 139 71.9
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 3.1e-53 212.6 139 70.5
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 4.1e-53 212.2 139 69.8
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 5.4e-53 211.8 139 69.8
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 5.4e-53 211.8 139 69.8
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 9.1e-53 211.1 139 69.8
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 9.1e-53 211.1 144 67.4
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.6e-52 210.3 139 69.1
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 2.0e-52 209.9 144 67.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 2.0e-52 209.9 139 69.1
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 2.0e-52 209.9 144 67.4
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.7e-52 209.5 139 69.8
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 2.7e-52 209.5 144 67.4
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 2.7e-52 209.5 144 67.4
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 2.7e-52 209.5 144 66.7
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.9e-52 208.4 139 68.3
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.9e-52 208.4 139 68.3
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 7.7e-52 208.0 157 64.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 1.3e-51 207.2 137 68.6
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.7e-51 206.8 139 68.3
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 2.3e-51 206.5 144 64.6
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 2.9e-51 206.1 139 69.1
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.9e-51 206.1 144 66.7
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 2.9e-51 206.1 139 67.6
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 3.8e-51 205.7 144 65.3
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 5.0e-51 205.3 138 69.6
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 5.0e-51 205.3 218 49.5
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 8.6e-51 204.5 139 66.2
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 8.6e-51 204.5 144 66.7
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.5e-50 203.8 139 67.6
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 1.5e-50 203.8 137 69.3
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.9e-50 203.4 139 66.9
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 1.9e-50 203.4 144 63.9
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 2.5e-50 203.0 138 68.8
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 5.5e-50 201.8 144 64.6
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 7.2e-50 201.4 164 59.8
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.2e-49 200.7 144 66.0
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 2.1e-49 199.9 152 63.8
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 2.1e-49 199.9 144 64.6
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 4.7e-49 198.7 144 64.6
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 4.7e-49 198.7 164 60.4
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 6.1e-49 198.4 157 62.4
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 6.1e-49 198.4 137 66.4
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 8.0e-49 198.0 164 59.1
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 8.0e-49 198.0 139 63.3
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 1.0e-48 197.6 133 66.9
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.4e-48 197.2 146 62.3
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.4e-48 197.2 146 62.3
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.8e-48 196.8 164 57.9
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.3e-48 196.4 139 66.9
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 2.3e-48 196.4 139 66.9
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 3.0e-48 196.1 164 57.9
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 4.0e-48 195.7 164 57.9
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 4.0e-48 195.7 164 57.9
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 4.0e-48 195.7 164 54.3
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 4.0e-48 195.7 146 61.6
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 6.8e-48 194.9 144 62.5
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 6.8e-48 194.9 137 67.9
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 6.8e-48 194.9 137 67.9
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 6.8e-48 194.9 136 65.4
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 8.9e-48 194.5 136 64.7
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.2e-47 194.1 164 56.7
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.5e-47 193.7 133 65.4
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.5e-47 193.7 140 64.3
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.5e-47 193.7 141 62.4
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 2.0e-47 193.4 145 61.4
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 2.6e-47 193.0 144 61.1
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 4.4e-47 192.2 136 65.4
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 5.7e-47 191.8 140 62.9
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 7.5e-47 191.4 167 56.9
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.4e-45 187.2 141 61.0
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.8e-45 186.8 133 60.9
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 1.8e-45 186.8 140 60.7
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 7.0e-45 184.9 164 53.0
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 5.9e-44 181.8 137 63.5
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.7e-43 180.3 146 55.5
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 7.5e-39 164.9 108 70.4
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 1.0e-35 154.5 140 50.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 3.0e-35 152.9 139 47.5
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 9.5e-34 147.9 143 47.6
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 2.3e-32 143.3 115 57.4
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 3.5e-28 129.4 92 65.2
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 4.3e-26 122.5 81 69.1
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 8.3e-22 108.2 113 49.6
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.9e-21 107.1 91 58.2
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 1.2e-20 104.4 118 53.4
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.0e-19 101.3 149 42.3
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 1.3e-19 100.9 60 76.7
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 1.8e-16 90.5 61 63.9
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.4e-15 86.3 44 84.1
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.4e-15 86.3 44 84.1
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 1.7e-14 84.0 123 34.1
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 4.2e-13 79.3 84 51.2
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.1e-09 67.0 38 78.9
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.1e-09 67.0 38 78.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.6e-09 66.2 51 60.8
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 5.3e-08 62.4 78 43.6
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.2e-07 61.2 80 41.2
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 2.0e-07 60.5 52 57.7
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 1.3e-06 57.8 64 48.4
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 2.9e-06 56.6 80 38.8


User provided reference genes

Program Settings