Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 0.0e+00 1174.1 613 100.0
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 5.7e-126 455.7 619 50.6
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 7.0e-124 448.7 639 46.9
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 2.0e-123 447.2 639 46.0
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 5.5e-121 439.1 632 46.4
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 2.1e-120 437.2 646 46.4
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 2.2e-117 427.2 551 49.7
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.8e-117 426.0 622 44.7
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 1.4e-116 424.5 615 46.2
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 4.1e-116 422.9 608 47.4
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 5.9e-115 419.1 641 44.8
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 7.7e-115 418.7 661 45.1
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 1.7e-114 417.5 593 46.9
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 3.8e-114 416.4 596 45.5
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 8.5e-114 415.2 660 44.7
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 1.9e-113 414.1 553 49.9
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 7.2e-113 412.1 549 49.4
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 7.2e-113 412.1 625 45.0
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.2e-112 411.4 555 47.9
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.1e-112 410.6 665 45.0
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 2.7e-112 410.2 631 45.5
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 4.7e-112 409.5 664 44.4
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 6.1e-112 409.1 634 44.8
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 8.0e-112 408.7 627 43.9
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 8.0e-112 408.7 672 44.8
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.8e-111 407.5 663 44.3
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 3.0e-111 406.8 634 45.3
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 3.0e-111 406.8 623 45.4
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.6e-110 403.7 593 45.9
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 4.4e-110 402.9 601 45.6
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 7.5e-110 402.1 612 45.9
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 7.5e-110 402.1 630 45.6
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 1.4e-108 397.9 601 45.4
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 3.1e-108 396.7 649 43.1
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 4.1e-108 396.4 620 43.7
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 9.2e-108 395.2 611 44.2
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.7e-107 393.7 578 43.8
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 2.5e-105 387.1 571 47.1
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 1.2e-102 378.3 641 42.0
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 1.2e-102 378.3 540 47.6
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.5e-102 377.9 548 46.5
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 1.5e-102 377.9 548 46.4
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 3.7e-101 373.2 557 45.4
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 8.3e-101 372.1 586 44.0
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 5.4e-100 369.4 654 41.1
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 5.4e-100 369.4 654 41.1
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 7.0e-100 369.0 620 41.9
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 7.5e-94 349.0 673 38.3
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 1.7e-90 337.8 585 41.5
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 1.1e-89 335.1 637 37.7
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 6.0e-83 312.8 443 48.3
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 2.5e-81 307.4 429 46.4
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 4.7e-80 303.1 313 56.5
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.2e-75 288.5 426 45.3
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 8.6e-74 282.3 513 40.0
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 1.4e-71 275.0 611 35.4
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 6.4e-69 266.2 505 38.2
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 1.7e-66 258.1 406 45.1
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 9.6e-65 252.3 308 47.7
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 1.1e-63 248.8 505 37.2
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 3.1e-63 247.3 283 50.9
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 6.9e-63 246.1 276 51.1
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 1.1e-60 238.8 389 44.2
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 3.2e-60 237.3 591 35.2
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.8e-58 231.5 404 42.6
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 6.7e-50 203.0 594 32.7
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.0e-46 191.4 228 47.4
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 3.4e-46 190.7 458 32.3
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 4.3e-41 173.7 218 48.6
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 9.0e-39 166.0 379 38.3
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 3.4e-38 164.1 198 53.0
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 8.5e-37 159.5 343 38.5
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.6e-35 155.2 162 49.4
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 8.7e-34 149.4 264 37.9
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 1.5e-33 148.7 317 35.3
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.1e-31 141.0 222 38.3
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.4e-30 137.5 223 35.9
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.4e-30 137.5 223 35.9
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 1.3e-29 135.6 160 46.9
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 2.1e-27 128.3 422 31.8
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.1e-26 123.6 296 32.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.4e-25 120.6 337 28.8
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 8.5e-21 106.3 183 37.2
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.1e-20 105.9 260 31.2
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 2.8e-16 91.3 106 54.7
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.8e-16 91.3 227 31.7
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 5.5e-12 77.0 237 34.2
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 4.7e-11 73.9 347 24.8
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 4.7e-11 73.9 233 29.2
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 4.7e-11 73.9 237 30.8
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.0e-10 72.8 237 30.4
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 1.4e-10 72.4 107 46.7
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 3.0e-10 71.2 237 30.8
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 4.0e-10 70.9 237 27.8
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 4.0e-10 70.9 237 30.4
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 4.0e-10 70.9 256 28.1
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 5.2e-10 70.5 227 28.2
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 6.7e-10 70.1 187 32.1
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 8.8e-10 69.7 238 27.3
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 8.8e-10 69.7 240 27.9
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.2e-09 69.3 256 27.0
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 1.5e-09 68.9 261 25.3
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 2.0e-09 68.6 228 27.2
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 2.6e-09 68.2 246 27.6
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 4.4e-09 67.4 242 27.7
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 5.7e-09 67.0 240 28.8
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 5.7e-09 67.0 240 28.3
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 5.7e-09 67.0 199 31.2
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 7.5e-09 66.6 240 27.1
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 9.7e-09 66.2 382 26.4
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 9.7e-09 66.2 329 25.8
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 1.3e-08 65.9 242 24.8
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.3e-08 65.9 213 26.3
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.8e-08 64.7 234 26.5
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.8e-08 64.7 234 26.5
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 4.8e-08 63.9 247 27.5
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 4.8e-08 63.9 191 28.8
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 4.8e-08 63.9 233 26.6
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 6.3e-08 63.5 276 26.8
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 8.2e-08 63.2 244 26.6
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 8.2e-08 63.2 221 29.9
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 8.2e-08 63.2 263 24.3
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 1.1e-07 62.8 240 27.5
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 1.4e-07 62.4 229 27.9
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.8e-07 62.0 229 29.3
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 1.8e-07 62.0 238 26.5
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.4e-07 61.6 216 27.3
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 3.1e-07 61.2 235 26.8
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 5.3e-07 60.5 269 24.2
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 5.3e-07 60.5 240 26.7
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 5.3e-07 60.5 190 27.4
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 7.0e-07 60.1 317 23.7
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 7.0e-07 60.1 449 24.5
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 5.9e-06 57.0 276 25.7


User provided reference genes

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